(Q33957523)

30 July 2017

title

RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach (English)

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30 July 2017

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6

Mikhail S Gelfand

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30 July 2017

7

Adam P Arkin

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30 July 2017

9

Inna Dubchak

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30 July 2017

Pavel S Novichkov

1

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30 July 2017

Dmitry A Rodionov

2

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30 July 2017

Elena D Stavrovskaya

3

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30 July 2017

Elena S Novichkova

4

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30 July 2017

Alexey E Kazakov

5

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30 July 2017

Andrey A Mironov

8

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30 July 2017

language of work or name

English

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publication date

11 June 2010

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30 July 2017

published in

Nucleic Acids Research

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30 July 2017

volume

38

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30 July 2017

issue

Web Server issue

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30 July 2017

page(s)

W299-307

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Creative Commons Attribution-NonCommercial 2.5 Generic

30 July 2017

copyright license

start time

4 October 2016

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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1 reference

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RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Rfam: updates to the RNA families database

5 July 2018

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Comparative genomics of regulation of fatty acid and branched-chain amino acid utilization in proteobacteria.

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Towards environmental systems biology of Shewanella

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

RSAT: regulatory sequence analysis tools

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation.

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks

5 July 2018

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DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Comparative genomic reconstruction of transcriptional regulatory networks in bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Computational reconstruction of iron- and manganese-responsive transcriptional networks in alpha-proteobacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

RegTransBase--a database of regulatory sequences and interactions in a wide range of prokaryotic genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

How does DNA sequence motif discovery work?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Evolution of transcriptional regulatory networks in microbial genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Dissimilatory metabolism of nitrogen oxides in bacteria: comparative reconstruction of transcriptional networks

5 July 2018

1 reference

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The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes

5 July 2018

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A novel method for accurate operon predictions in all sequenced prokaryotes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Reconstruction of regulatory and metabolic pathways in metal-reducing delta-proteobacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Regulog analysis: detection of conserved regulatory networks across bacteria: application to Staphylococcus aureus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

A comparative genomics approach to prediction of new members of regulons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Phylogenetic footprinting of transcription factor binding sites in proteobacterial genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Predicting regulons and their cis-regulatory motifs by comparative genomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Prediction of transcription regulatory sites in Archaea by a comparative genomic approach

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Computer analysis of transcription regulatory patterns in completely sequenced bacterial genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896116

Identification of a bacterial regulatory system for ribonucleotide reductases by phylogenetic profiling.

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ531

21 January 2018

Identifiers

DOI

10.1093/NAR/GKQ531

1 reference

journals/nar/NovichkovRSNKGAMD10

30 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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30 July 2017

1 reference