(Q33998688)

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Combining genome-wide association mapping and transcriptional networks to identify novel genes controlling glucosinolates in Arabidopsis thaliana

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11 February 2020

Combining genome-wide association mapping and transcriptional networks to identify novel genes controlling glucosinolates in Arabidopsis thaliana (English)

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11 February 2020

genome-wide association study

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Arabidopsis thaliana

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11 February 2020

Daniel J. Kliebenstein

5

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11 February 2020

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Heather C Rowe

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11 February 2020

Jason A Corwin

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11 February 2020

Bindu Joseph

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11 February 2020

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16 August 2011

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11 February 2020

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11 February 2020

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11 February 2020

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11 February 2020

e1001125

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11 February 2020

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16 August 2011

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The complex genetic architecture of the metabolome

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Is replication the gold standard for validating genome-wide association findings?

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Incremental steps toward incompatibility revealed by Arabidopsis epistatic interactions modulating salicylic acid pathway activation.

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A glucosinolate metabolism pathway in living plant cells mediates broad-spectrum antifungal defense

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Glucosinolate metabolites required for an Arabidopsis innate immune response

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ATTED-II provides coexpressed gene networks for Arabidopsis

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Genetic networks controlling structural outcome of glucosinolate activation across development

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A novel 2-oxoacid-dependent dioxygenase involved in the formation of the goiterogenic 2-hydroxybut-3-enyl glucosinolate and generalist insect resistance in Arabidopsis,.

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5 July 2018

Complex genetics control natural variation in Arabidopsis thaliana resistance to Botrytis cinerea

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Costs of resistance to natural enemies in field populations of the annual plant Arabidopsis thaliana

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The glutathione-deficient mutant pad2-1 accumulates lower amounts of glucosinolates and is more susceptible to the insect herbivore Spodoptera littoralis

1 reference

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Efficient control of population structure in model organism association mapping

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A role for gene duplication and natural variation of gene expression in the evolution of metabolism

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Amino acid polymorphisms in Arabidopsis phytochrome B cause differential responses to light

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Low levels of polymorphism in genes that control the activation of defense response in Arabidopsis thaliana

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Indole-3-acetonitrile production from indole glucosinolates deters oviposition by Pieris rapae

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A systems biology approach identifies a R2R3 MYB gene subfamily with distinct and overlapping functions in regulation of aliphatic glucosinolates

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The extent of linkage disequilibrium in Arabidopsis thaliana

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The ecological genetics of aliphatic glucosinolates

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A gene controlling variation in Arabidopsis glucosinolate composition is part of the methionine chain elongation pathway

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5 July 2018

The genetic architecture of quantitative traits

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5 July 2018

Comparative quantitative trait loci mapping of aliphatic, indolic and benzylic glucosinolate production in Arabidopsis thaliana leaves and seeds

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The role of spatial scale and intraspecific variation in secondary chemistry in host-plant location by Ceutorhynchus assimilis (Coleoptera: Curculionidae)

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Genetic control of natural variation in Arabidopsis glucosinolate accumulation

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The scale independence of evolution

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Gene duplication in the diversification of secondary metabolism: tandem 2-oxoglutarate-dependent dioxygenases control glucosinolate biosynthesis in Arabidopsis

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The probability of duplicate gene preservation by subfunctionalization

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Genetic Constraints and Selection Acting on Tolerance to Herbivory in the Common Morning Glory Ipomoea purpurea

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156686

5 July 2018

GIGANTEA: a circadian clock-controlled gene that regulates photoperiodic flowering in Arabidopsis and encodes a protein with several possible membrane-spanning domains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156686

5 July 2018

The Arabidopsis ERECTA gene encodes a putative receptor protein kinase with extracellular leucine-rich repeats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156686

5 July 2018

Assessing the prospects of genome-wide association studies performed in inbred mice

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Biochemical networks and epistasis shape the Arabidopsis thaliana metabolome

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Divergent evolution of duplicate genes leads to genetic incompatibilities within A. thaliana

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Pseudomonas sax genes overcome aliphatic isothiocyanate-mediated non-host resistance in Arabidopsis.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Differential levels of insect herbivory in the field associated with genotypic variation in glucosinolates in Arabidopsis thaliana.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Competition, herbivory and genetics interact to determine the accumulation and fitness consequences of a defence metabolite

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Myzus persicae (green peach aphid) feeding on Arabidopsis induces the formation of a deterrent indole glucosinolate.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Mutual feedbacks maintain both genetic and species diversity in a plant community

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Specialist and generalist herbivores exert opposing selection on a chemical defense

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Community complexity drives patterns of natural selection on a chemical defense of Brassica nigra

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Variation of glucosinolate accumulation among different organs and developmental stages of Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Genotype, age, tissue, and environment regulate the structural outcome of glucosinolate activation.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Subclade of flavin-monooxygenases involved in aliphatic glucosinolate biosynthesis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Identification of a flavin-monooxygenase as the S-oxygenating enzyme in aliphatic glucosinolate biosynthesis in Arabidopsis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Characterization of seed-specific benzoyloxyglucosinolate mutations in Arabidopsis thaliana.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Secondary metabolites influence Arabidopsis/Botrytis interactions: variation in host production and pathogen sensitivity

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Epistasis and balanced polymorphism influencing complex trait variation

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Biosynthesis of methionine-derived glucosinolates in Arabidopsis thaliana: recombinant expression and characterization of methylthioalkylmalate synthase, the condensing enzyme of the chain-elongation cycle

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Glucosinolate engineering identifies a gamma-glutamyl peptidase.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Phototropic stimulation induces the conversion of glucosinolate to phototropism-regulating substances of radish hypocotyls.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Induction of myrosinase gene expression and myrosinase activity in radish hypocotyls by phototropic stimulation

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Natural allelic variation in the temperature-compensation mechanisms of the Arabidopsis thaliana circadian clock

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Natural variation among Arabidopsis thaliana accessions for transcriptome response to exogenous salicylic acid

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Arabidopsis SLIM1 is a central transcriptional regulator of plant sulfur response and metabolism.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Elucidation of gene-to-gene and metabolite-to-gene networks in arabidopsis by integration of metabolomics and transcriptomics

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

A complex interplay of three R2R3 MYB transcription factors determines the profile of aliphatic glucosinolates in Arabidopsis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

The Correlation between Relatives on the Supposition of Mendelian Inheritance

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

The evolution of functionally novel proteins after gene duplication.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

An Arabidopsis thaliana thionin gene is inducible via a signal transduction pathway different from that for pathogenesis-related proteins

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Benzoic acid glucosinolate esters and other glucosinolates from Arabidopsis thaliana

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Control of circadian rhythms and photoperiodic flowering by the Arabidopsis GIGANTEA gene

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

A Gene Controlling Variation in Arabidopsis Glucosinolate Composition Is Part of the Methionine Chain Elongation Pathway

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Sequence diversity and haplotype associations with phenotypic responses to crowding: GIGANTEA affects fruit set in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156686

29 October 2018

Development of an AFLP based linkage map of Ler, Col and Cvi Arabidopsis thaliana ecotypes and construction of a Ler/Cvi recombinant inbred line population

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

The genetics of plant metabolism

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

Pajek— Analysis and Visualization of Large Networks

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PBIO.1001125

21 January 2018

QTL analysis of flowering time in Arabidopsis thaliana

1 reference

https://pubmed.ncbi.nlm.nih.gov/21857804

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distinctive types of ATP-dependent Clp proteases in cyanobacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/21857804

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Wounding and chemicals induce expression of the Arabidopsis thaliana gene Thi2.1, encoding a fungal defense thionin, via the octadecanoid pathway

1 reference

https://pubmed.ncbi.nlm.nih.gov/21857804

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a Flavonol 7-O-Rhamnosyltransferase Gene Determining Flavonoid Pattern inArabidopsisby Transcriptome Coexpression Analysis and Reverse Genetics

1 reference

https://pubmed.ncbi.nlm.nih.gov/21857804

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PBIO.1001125

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21857804%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21857804%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21857804%20AND%20SRC:MED&resulttype=core&format=json

11 February 2020

ResearchGate publication ID

0 references

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