(Q34107456)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

title

Origin remodeling and opening in bacteria rely on distinct assembly states of the DnaA initiator (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

6

James M Berger

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

author name string

Melissa L Mott

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Nancy J Crisona

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Kevin Chuang

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

Haw Yang

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

language of work or name

English

0 references

publication date

1 July 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

number of pages

11

1 reference

Journal of Biological Chemistry

inferred from page(s)

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

volume

285

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

page(s)

28229-28239

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

issue

36

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

Bacterial origin recognition complexes direct assembly of higher-order DnaA oligomeric structures

6 February 2020

cites work

1 reference

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Structural Synergy and Molecular Crosstalk between Bacterial Helicase Loaders and Replication Initiators

5 July 2018

1 reference

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A common mechanism for the ATP-DnaA-dependent formation of open complexes at the replication origin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Mutational analysis reveals Escherichia coli oriC interacts with both DnaA-ATP and DnaA-ADP during pre-RC assembly

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

DNA replication initiation: mechanisms and regulation in bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Replisome mechanics: insights into a twin DNA polymerase machine

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

The Crystal Structure of the SV40 T-Antigen Origin Binding Domain in Complex with DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

ATP-dependent minor groove recognition of TA base pairs is required for template melting by the E1 initiator protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Evolutionary relationships and structural mechanisms of AAA+ proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Binding and unwinding: SF3 viral helicases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Origin recognition and the chromosome cycle

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Evolution and classification of P-loop kinases and related proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Initiation of DNA replication: lessons from viral initiator proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Structural basis of replication origin recognition by the DnaA protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Common domains in the initiators of DNA replication in Bacteria, Archaea and Eukarya: combined structural, functional and phylogenetic perspectives.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Strand-specific loading of DnaB helicase by DnaA to a substrate mimicking unwound oriC.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Characterization of simian virus 40 T-antigen double hexamers bound to a replication fork. The active form of the helicase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

DNA replication in eukaryotic cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Mechanism of origin unwinding: sequential binding of DnaA to double- and single-stranded DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Large T-antigen double hexamers imaged at the simian virus 40 origin of replication

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

ATP- and ADP-dnaA protein, a molecular switch in gene regulation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

The Orc4p and Orc5p subunits of the Xenopus and human origin recognition complex are related to Orc1p and Cdc6p

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Site-directed mutational analysis for the ATP binding of DnaA protein. Functions of two conserved amino acids (Lys-178 and Asp-235) located in the ATP-binding domain of DnaA protein in vitro and in vivo.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Coordinate binding of ATP and origin DNA regulates the ATPase activity of the origin recognition complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Biochemical analysis of mutants with changes in the origin-binding domain of simian virus 40 tumor antigen

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

The E1 protein of bovine papilloma virus 1 is an ATP-dependent DNA helicase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Replicatively active complexes of DnaA protein and the Escherichia coli chromosomal origin observed in the electron microscope

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

The DNA binding domain of the initiator protein DnaA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

A hot spot of binding energy in a hormone-receptor interface

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Changes in site specificity of single-strand-specific endonucleases on supercoiled PM2 DNA with temperature and ionic environment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

The reliability of molecular weight determinations by dodecyl sulfate-polyacrylamide gel electrophoresis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

In vitro assembly of a prepriming complex at the origin of the Escherichia coli chromosome.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

ATP activates dnaA protein in initiating replication of plasmids bearing the origin of the E. coli chromosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Sites of dnaA protein-binding in the replication origin of the Escherichia coli K-12 chromosome.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Localized melting and structural changes in the SV40 origin of replication induced by T-antigen.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

The DNA unwinding element: a novel, cis-acting component that facilitates opening of the Escherichia coli replication origin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

The AT richness and gid transcription determine the left border of the replication origin of the E. coli chromosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Localized DNA melting and structural pertubations in the origin of replication, oriC, of Escherichia coli in vitro and in vivo

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2934688

Escherichia coli prereplication complex assembly is regulated by dynamic interplay among Fis, IHF and DnaA.

5 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

Stoichiometry of DnaA and DnaB protein in initiation at the Escherichia coli chromosomal origin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

DnaA Protein of Escherichia coli: oligomerization at the E. coli chromosomal origin is required for initiation and involves specific N-terminal amino acids

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

An essential tryptophan of Escherichia coli DnaA protein functions in oligomerization at the E. coli replication origin

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

Structure and function of DnaA N-terminal domains: specific sites and mechanisms in inter-DnaA interaction and in DnaB helicase loading on oriC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

Formation of an ATP-DnaA-specific initiation complex requires DnaA Arginine 285, a conserved motif in the AAA+ protein family.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

Analysis of the DNA-binding domain of Escherichia coli DnaA protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

CDK phosphorylation inhibits the DNA-binding and ATP-hydrolysis activities of the Drosophila origin recognition complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

Alteration of Escherichia coli topoisomerase IV conformation upon enzyme binding to positively supercoiled DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.147975

A comprehensive set of DnaA-box mutations in the replication origin, oriC, of Escherichia coli

21 January 2018

1 reference

12 December 2020

The Escherichia coli dnaA gene: four functional domains

1 reference

12 December 2020

Escherichia coli DnaA protein. The N-terminal domain and loading of DnaB helicase at the E. coli chromosomal origin

1 reference

12 December 2020

Functional analysis of affinity-purified polyhistidine-tagged DnaA protein

1 reference

12 December 2020

Understanding how the replisome works

1 reference

12 December 2020

AAA+ ATPases in the initiation of DNA replication

1 reference

12 December 2020

The N-terminus promotes oligomerization of the Escherichia coli initiator protein DnaA

1 reference

12 December 2020

Replisome assembly at oriC, the replication origin of E. coli, reveals an explanation for initiation sites outside an origin

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M110.147975

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20595381%20AND%20SRC:MED&resulttype=core&format=json

6 February 2020

1 reference