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The code within the code: microRNAs target coding regions
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instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
title
The code within the code: microRNAs target coding regions
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
main subject
microRNA
1 reference
based on heuristic
inferred from title
author name string
Joshua J Forman
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
Hilary A Coller
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
publication date
15 April 2010
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
published in
Cell Cycle
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
volume
9
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
issue
8
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
page(s)
1533-1541
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
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HuR recruits let-7/RISC to repress c-Myc expression
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Argonaute HITS-CLIP decodes microRNA-mRNA interaction maps
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MicroRNAs: target recognition and regulatory functions
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Repression of C. elegans microRNA targets at the initiation level of translation requires GW182 proteins
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A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence
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MicroRNAs to Nanog, Oct4 and Sox2 coding regions modulate embryonic stem cell differentiation
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let-7 regulates Dicer expression and constitutes a negative feedback loop
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Widespread changes in protein synthesis induced by microRNAs
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5 July 2018
The impact of microRNAs on protein output
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5 July 2018
The meaning of nonsense
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MicroRNA-126 regulates HOXA9 by binding to the homeobox
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5 July 2018
miR-148 targets human DNMT3b protein coding region
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5 July 2018
p16(INK4a) translation suppressed by miR-24
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5 July 2018
Interactions between UPF1, eRFs, PABP and the exon junction complex suggest an integrated model for mammalian NMD pathways
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5 July 2018
Getting to the root of miRNA-mediated gene silencing
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5 July 2018
RNA-binding protein Dnd1 inhibits microRNA access to target mRNA
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PubMed Central
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5 July 2018
NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity
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5 July 2018
Switching from repression to activation: microRNAs can up-regulate translation
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5 July 2018
Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells
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5 July 2018
Target-specific requirements for enhancers of decapping in miRNA-mediated gene silencing
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5 July 2018
Inhibition of nonsense-mediated mRNA decay (NMD) by a new chemical molecule reveals the dynamic of NMD factors in P-bodies
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5 July 2018
Derepression of microRNA-mediated protein translation inhibition by apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3G (APOBEC3G) and its family members
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5 July 2018
The let-7 microRNA represses cell proliferation pathways in human cells
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5 July 2018
Let-7 microRNA-mediated mRNA deadenylation and translational repression in a mammalian cell-free system
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5 July 2018
MicroRNA targeting specificity in mammals: determinants beyond seed pairing
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5 July 2018
Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5' UTR as in the 3' UTR
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PubMed Central
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5 July 2018
An mRNA m7G cap binding-like motif within human Ago2 represses translation
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5 July 2018
P-body formation is a consequence, not the cause, of RNA-mediated gene silencing
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5 July 2018
MicroRNAs silence gene expression by repressing protein expression and/or by promoting mRNA decay.
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PubMed Central
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5 July 2018
An alternative branch of the nonsense-mediated decay pathway
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PubMed Central
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5 July 2018
The genetic code is nearly optimal for allowing additional information within protein-coding sequences
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5 July 2018
Detecting non-coding selective pressure in coding regions
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5 July 2018
The highways and byways of mRNA decay
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5 July 2018
P bodies: at the crossroads of post-transcriptional pathways
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5 July 2018
A pattern-based method for the identification of MicroRNA binding sites and their corresponding heteroduplexes
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5 July 2018
mRNA degradation by miRNAs and GW182 requires both CCR4:NOT deadenylase and DCP1:DCP2 decapping complexes
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5 July 2018
Relief of microRNA-mediated translational repression in human cells subjected to stress
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5 July 2018
Targeting of aberrant mRNAs to cytoplasmic processing bodies
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5 July 2018
Post-transcriptional small RNA pathways in plants: mechanisms and regulations
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5 July 2018
MicroRNAs direct rapid deadenylation of mRNA
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5 July 2018
Zebrafish MiR-430 promotes deadenylation and clearance of maternal mRNAs
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5 July 2018
Short RNAs repress translation after initiation in mammalian cells.
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5 July 2018
Quality control of gene expression: a stepwise assembly pathway for the surveillance complex that triggers nonsense-mediated mRNA decay
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5 July 2018
Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay
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5 July 2018
MicroRNAs control translation initiation by inhibiting eukaryotic initiation factor 4E/cap and poly(A) tail function
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5 July 2018
Human RISC couples microRNA biogenesis and posttranscriptional gene silencing
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5 July 2018
Exon-junction complex components specify distinct routes of nonsense-mediated mRNA decay with differential cofactor requirements
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5 July 2018
Nonsense-mediated mRNA decay factors act in concert to regulate common mRNA targets
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5 July 2018
A crucial role for GW182 and the DCP1:DCP2 decapping complex in miRNA-mediated gene silencing
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5 July 2018
Regulation by let-7 and lin-4 miRNAs results in target mRNA degradation
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5 July 2018
Regulated degradation of replication-dependent histone mRNAs requires both ATR and Upf1
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5 July 2018
Inhibition of translational initiation by Let-7 MicroRNA in human cells
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5 July 2018
Nonsense-mediated mRNA decay: molecular insights and mechanistic variations across species
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5 July 2018
Involvement of microRNA in AU-rich element-mediated mRNA instability
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5 July 2018
Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs
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5 July 2018
Mammalian Staufen1 recruits Upf1 to specific mRNA 3'UTRs so as to elicit mRNA decay
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5 July 2018
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
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5 July 2018
Substrate requirements for let-7 function in the developing zebrafish embryo
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5 July 2018
Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise
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5 July 2018
RNA silencing in plants
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PubMed Central
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5 July 2018
The functions of animal microRNAs
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5 July 2018
Argonaute2 is the catalytic engine of mammalian RNAi
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
Computational identification of plant microRNAs and their targets, including a stress-induced miRNA
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
Specificity of microRNA target selection in translational repression
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PubMed Central
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5 July 2018
The enzymes and control of eukaryotic mRNA turnover
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5 July 2018
MicroRNAs: genomics, biogenesis, mechanism, and function
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5 July 2018
Prediction of mammalian microRNA targets
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5 July 2018
Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast
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5 July 2018
Ribosome loading onto the mRNA cap is driven by conformational coupling between eIF4G and eIF4E
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
Nonsense-mediated mRNA decay in mammalian cells involves decapping, deadenylating, and exonucleolytic activities
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
An NMD pathway in yeast involving accelerated deadenylation and exosome-mediated 3'-->5' degradation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation.
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
Fragile X-related protein and VIG associate with the RNA interference machinery
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
Micro RNAs are complementary to 3' UTR sequence motifs that mediate negative post-transcriptional regulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
Upf1p, Nmd2p, and Upf3p regulate the decapping and exonucleolytic degradation of both nonsense-containing mRNAs and wild-type mRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
The spliceosome deposits multiple proteins 20-24 nucleotides upstream of mRNA exon-exon junctions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
A rule for termination-codon position within intron-containing genes: when nonsense affects RNA abundance
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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5 July 2018
Residues that affect human Argonaute2 concentration in cytoplasmic processing bodies
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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28 October 2018
GW182 interaction with Argonaute is essential for miRNA-mediated translational repression and mRNA decay
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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28 October 2018
The birth and death of microRNA genes in Drosophila.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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28 October 2018
Drosophila miR2 induces pseudo-polysomes and inhibits translation initiation.
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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28 October 2018
UPF1 is required for nonsense-mediated mRNA decay (NMD) and RNAi in Arabidopsis.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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28 October 2018
Recapitulation of short RNA-directed translational gene silencing in vitro
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stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
retrieved
28 October 2018
Two genetic circuits repress the Caenorhabditis elegans heterochronic gene lin-28 after translation initiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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28 October 2018
A link between RNA interference and nonsense-mediated decay in Caenorhabditis elegans
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936675
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28 October 2018
MicroRNA Inhibition of Translation Initiation in Vitro by Targeting the Cap-Binding Complex eIF4F
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/20372064
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.4161/CC.9.8.11202
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
PMCID
2936675
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
PubMed ID
20372064
1 reference
stated in
Europe PubMed Central
PubMed ID
20372064
retrieved
31 July 2017
ResearchGate publication ID
43050353
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