(Q34114642)

31 July 2017

title

A new strategy for better genome assembly from very short reads (English)

1 reference

31 July 2017

Yan Ji

1

1 reference

31 July 2017

Yixiang Shi

series ordinal

2

1 reference

31 July 2017

Guohui Ding

series ordinal

3

1 reference

31 July 2017

Yixue Li

series ordinal

4

1 reference

31 July 2017

publication date

30 December 2011

1 reference

31 July 2017

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31 July 2017

volume

12

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31 July 2017

page(s)

493

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describes a project that uses

31 July 2017

MUMmer

object named as

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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1 reference

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Evaluation of next-generation sequencing software in mapping and assembly

28 July 2018

1 reference

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Next generation sequence assembly with AMOS.

28 July 2018

1 reference

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Limitations of next-generation genome sequence assembly

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268122

Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data

28 July 2018

1 reference

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Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

28 July 2018

1 reference

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De novo assembly of a 40 Mb eukaryotic genome from short sequence reads: Sordaria macrospora, a model organism for fungal morphogenesis

28 July 2018

1 reference

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28 July 2018

A primer on metagenomics

1 reference

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Assembling genomes using short-read sequencing technology.

28 July 2018

1 reference

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Assembly complexity of prokaryotic genomes using short reads

28 July 2018

1 reference

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De novo assembly of human genomes with massively parallel short read sequencing

28 July 2018

1 reference

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The sequence and de novo assembly of the giant panda genome

28 July 2018

1 reference

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Sequencing technologies - the next generation

28 July 2018

1 reference

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The genome of the cucumber, Cucumis sativus L

28 July 2018

1 reference

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28 July 2018

1 reference

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De novo genome sequence assembly of a filamentous fungus using Sanger, 454 and Illumina sequence data

28 July 2018

1 reference

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Genome assembly reborn: recent computational challenges

28 July 2018

1 reference

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28 July 2018

1 reference

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De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae

28 July 2018

1 reference

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MetaSim: a sequencing simulator for genomics and metagenomics

28 July 2018

1 reference

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Gene-boosted assembly of a novel bacterial genome from very short reads

28 July 2018

1 reference

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

28 July 2018

1 reference

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28 July 2018

1 reference

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An analysis of the feasibility of short read sequencing

28 July 2018

1 reference

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De novo assembly of short sequence reads

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268122

Mapping short DNA sequencing reads and calling variants using mapping quality scores

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268122

Genome sequencing in microfabricated high-density picolitre reactors

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268122

Comparative genome assembly.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268122

Hierarchical scaffolding with Bambus

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268122

De novoassembly of thePseudomonas syringaepv.syringaeB728a genome using Illumina/Solexa short sequence reads

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3268122

28 October 2018

Identifiers

DOI

10.1186/1471-2105-12-493

1 reference

31 July 2017

DBLP publication ID

journals/bmcbi/JiSDL11

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

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31 July 2017

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