(Q34171196)

31 July 2017

title

Optimizing a massive parallel sequencing workflow for quantitative miRNA expression analysis (English)

1 reference

31 July 2017

0 references

1 reference

Marco Beccuti

2

0 references

Francesca Cordero

Francesca Cordero

1

0 references

Raffaele A. Calogero

Raffaele A Calogero

5

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author name string

Maddalena Arigoni

3

1 reference

31 July 2017

Susanna Donatelli

4

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31 July 2017

language of work or name

English

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publication date

20 February 2012

1 reference

31 July 2017

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31 July 2017

volume

7

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31 July 2017

issue

2

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31 July 2017

page(s)

e31630

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Creative Commons Attribution 4.0 International

31 July 2017

copyright license

start time

20 February 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

edgeR

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

DESeq2

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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5 July 2018

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Barcoding bias in high-throughput multiplex sequencing of miRNA.

5 July 2018

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Differential expression analysis for sequence count data

5 July 2018

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baySeq: empirical Bayesian methods for identifying differential expression in sequence count data

5 July 2018

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5 July 2018

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A scaling normalization method for differential expression analysis of RNA-seq data

5 July 2018

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Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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miRExpress: analyzing high-throughput sequencing data for profiling microRNA expression

5 July 2018

1 reference

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Quantitative miRNA expression analysis: comparing microarrays with next-generation sequencing.

5 July 2018

1 reference

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5 July 2018

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RazerS--fast read mapping with sensitivity control

5 July 2018

1 reference

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5 July 2018

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5 July 2018

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5 July 2018

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Dissecting an alternative splicing analysis workflow for GeneChip Exon 1.0 ST Affymetrix arrays

5 July 2018

1 reference

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Discovering microRNAs from deep sequencing data using miRDeep

5 July 2018

1 reference

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5 July 2018

1 reference

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Striped Smith-Waterman speeds database searches six times over other SIMD implementations

5 July 2018

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

5 July 2018

1 reference

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Efficient q-gram filters for finding all epsilon-matches over a given length

5 July 2018

1 reference

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Rank products: a simple, yet powerful, new method to detect differentially regulated genes in replicated microarray experiments

5 July 2018

1 reference

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A uniform system for microRNA annotation

5 July 2018

1 reference

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Significance analysis of microarrays applied to the ionizing radiation response

5 July 2018

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Basic principles of ROC analysis

5 July 2018

1 reference

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5 July 2018

1 reference

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A toolkit for analysing large-scale plant small RNA datasets

21 January 2018

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21 January 2018

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Accurate estimation of expression levels of homologous genes in RNA-seq experiments.

21 January 2018

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21 January 2018

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21 January 2018

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10.1371/JOURNAL.PONE.0031630

28 October 2018

Identifiers

DOI

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31 July 2017

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31 July 2017

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