(Q34182245)

31 July 2017

title

Structure-based prediction of potential binding and nonbinding peptides to HIV-1 protease (English)

1 reference

31 July 2017

2

Turkan Haliloglu

1 reference

31 July 2017

Nese Kurt

1

1 reference

31 July 2017

Celia A Schiffer

series ordinal

3

1 reference

31 July 2017

language of work or name

English

0 references

publication date

1 August 2003

1 reference

31 July 2017

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31 July 2017

volume

85

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31 July 2017

issue

2

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31 July 2017

page(s)

853-863

1 reference

Substrate shape determines specificity of recognition for HIV-1 protease: analysis of crystal structures of six substrate complexes

31 July 2017

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1 reference

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Structure-based prediction of binding peptides to MHC class I molecules: application to a broad range of MHC alleles

28 July 2018

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How does a symmetric dimer recognize an asymmetric substrate? A substrate complex of HIV-1 protease

28 July 2018

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28 July 2018

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Protein secondary structure prediction based on position-specific scoring matrices

28 July 2018

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Enhanced protein fold recognition using secondary structure information from NMR.

28 July 2018

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Packing of sidechains in low-resolution models for proteins

28 July 2018

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A structure-based algorithm to predict potential binding peptides to MHC molecules with hydrophobic binding pockets

28 July 2018

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Efficient characterization of collective motions and interresidue correlations in proteins by low-resolution simulations.

28 July 2018

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Protein fold recognition by prediction-based threading

28 July 2018

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Inter-residue potentials in globular proteins and the dominance of highly specific hydrophilic interactions at close separation

28 July 2018

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Prediction of human immunodeficiency virus protease cleavage sites in proteins

28 July 2018

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Structure-derived potentials and protein simulations

28 July 2018

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Protein fold recognition by mapping predicted secondary structures.

28 July 2018

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The antigenic identity of peptide-MHC complexes: A comparison of the conformations of five viral peptides presented by HLA-A2

28 July 2018

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Ranking potential binding peptides to MHC molecules by a computational threading approach

28 July 2018

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Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.

28 July 2018

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Protein tertiary structure recognition using optimized Hamiltonians with local interactions

28 July 2018

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The Protein Data Bank: a computer-based archival file for macromolecular structures

28 July 2018

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Coarse-grained simulations of conformational dynamics of proteins: application to apomyoglobin

28 July 2018

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Short-range conformational energies, secondary structure propensities, and recognition of correct sequence-structure matches

28 October 2018

1 reference

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Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading.

28 October 2018

1 reference

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Conformations of folded proteins in restricted spaces

28 October 2018

1 reference

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Characterization of internal motions of Escherichia coli ribonuclease H by Monte Carlo simulation

28 October 2018

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https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974525-1

Conformational dynamics of chymotrypsin inhibitor 2 by coarse-grained simulations

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974525-1

Equation of State Calculations by Fast Computing Machines

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974525-1

10.1016/S0006-3495(03)74525-1

7 January 2021

Identifiers

DOI

1 reference

31 July 2017

1 reference

31 July 2017

1 reference