(Q34193832)

31 July 2017

title

16S rRNA gene pyrosequencing of reference and clinical samples and investigation of the temperature stability of microbiome profiles (English)

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31 July 2017

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9

Richard G Jarman

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31 July 2017

Jun Hang

1

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31 July 2017

Valmik Desai

2

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31 July 2017

Nela Zavaljevski

3

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31 July 2017

Yu Yang

4

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31 July 2017

Xiaoxu Lin

5

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31 July 2017

Ravi Vijaya Satya

6

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31 July 2017

Luis J Martinez

7

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31 July 2017

Jason M Blaylock

8

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31 July 2017

Stephen J Thomas

10

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31 July 2017

Robert A Kuschner

11

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31 July 2017

publication date

16 September 2014

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31 July 2017

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31 July 2017

volume

2

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31 July 2017

page(s)

31

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https://scigraph.springernature.com/pub.10.1186/2049-2618-2-31

31 July 2017

exact match

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cites work

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5 July 2018

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5 July 2018

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The gut microbiome modulates colon tumorigenesis

5 July 2018

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Differential abundance analysis for microbial marker-gene surveys

5 July 2018

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Role of gut microbiota in obesity, type 2 diabetes and Alzheimer's disease

5 July 2018

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Investigating the impact of storage conditions on microbial community composition in soil samples

5 July 2018

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Meta-analyses of studies of the human microbiota

5 July 2018

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Biogeography of the ecosystems of the healthy human body

5 July 2018

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Hypothesis testing and power calculations for taxonomic-based human microbiome data

5 July 2018

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16S rRNA survey revealed complex bacterial communities and evidence of bacterial interference on human adenoids

5 July 2018

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Characterization of the fecal microbiota using high-throughput sequencing reveals a stable microbial community during storage

5 July 2018

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Assessing bacterial populations in the lung by replicate analysis of samples from the upper and lower respiratory tracts

5 July 2018

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Microbiome diversity in the bronchial tracts of patients with chronic obstructive pulmonary disease

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets

5 July 2018

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The "most wanted" taxa from the human microbiome for whole genome sequencing

5 July 2018

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Storage conditions of intestinal microbiota matter in metagenomic analysis

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Primer3--new capabilities and interfaces

5 July 2018

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Evaluation of 16S rDNA-based community profiling for human microbiome research

5 July 2018

1 reference

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A framework for human microbiome research

5 July 2018

1 reference

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Structure, function and diversity of the healthy human microbiome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Comparison of DNA extraction methods for microbial community profiling with an application to pediatric bronchoalveolar lavage samples

5 July 2018

1 reference

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Deep sequencing analyses of low density microbial communities: working at the boundary of accurate microbiota detection

5 July 2018

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Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Experimental and analytical tools for studying the human microbiome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Human microbiome in health and disease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

UCHIME improves sensitivity and speed of chimera detection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Topographical continuity of bacterial populations in the healthy human respiratory tract

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Towards the human colorectal cancer microbiome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Moving pictures of the human microbiome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Removing noise from pyrosequenced amplicons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

UniFrac: an effective distance metric for microbial community comparison

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Comparative analyses of the bacterial microbiota of the human nostril and oropharynx.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

A catalog of reference genomes from the human microbiome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Effect of storage conditions on the assessment of bacterial community structure in soil and human-associated samples

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

QIIME allows analysis of high-throughput community sequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Bacterial community variation in human body habitats across space and time

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

The NIH Human Microbiome Project

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

An obesity-associated gut microbiome with increased capacity for energy harvest

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

Sequencing of 16S rRNA gene: a rapid tool for identification of Bacillus anthracis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165438

The microbiome explored: recent insights and future challenges

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F2049-2618-2-31

Experimental factors affecting PCR-based estimates of microbial species richness and evenness.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F2049-2618-2-31

Effect of sample storage conditions on culture-independent bacterial community measures in cystic fibrosis sputum specimens

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F2049-2618-2-31

21 January 2018

Identifiers

DOI

10.1186/2049-2618-2-31

1 reference

Dimensions Publication ID

31 July 2017

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31 July 2017

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