(Q34248287)

31 July 2017

title

Determination of an ensemble of structures representing the intermediate state of the bacterial immunity protein Im7. (English)

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31 July 2017

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7

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31 July 2017

6

Emanuele Paci

1 reference

31 July 2017

8

Michele Vendruscolo

1 reference

31 July 2017

Geoffrey Robert Moore

5

object named as

Geoffrey R Moore

1 reference

31 July 2017

Joerg Gsponer

1

1 reference

31 July 2017

Harri Hopearuoho

2

1 reference

31 July 2017

Sara B-M Whittaker

3

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31 July 2017

Graham R Spence

4

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31 July 2017

language of work or name

English

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publication date

21 December 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

31 July 2017

published in

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31 July 2017

volume

103

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31 July 2017

issue

1

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31 July 2017

page(s)

99-104

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

31 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

A funneled energy landscape for cytochrome c directly predicts the sequential folding route inferred from hydrogen exchange experiments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

A protein folding pathway with multiple folding intermediates at atomic resolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Protein folding: the stepwise assembly of foldon units

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Enhanced picture of protein-folding intermediates using organic solvents in H/D exchange and quench-flow experiments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Relationship of Leffler (Bronsted) alpha values and protein folding Phi values to position of transition-state structures on reaction coordinates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Trapping the on-pathway folding intermediate of Im7 at equilibrium.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Demonstration of a low-energy on-pathway intermediate in a fast-folding protein by kinetics, protein engineering, and simulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Calculation of mutational free energy changes in transition states for protein folding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Rapid and accurate calculation of protein 1H, 13C and 15N chemical shifts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Hydrogen-exchange stability analysis of Bergerac-Src homology 3 variants allows the characterization of a folding intermediate in equilibrium

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Determination of a transition state at atomic resolution from protein engineering data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Early kinetic intermediate in the folding of acyl-CoA binding protein detected by fluorescence labeling and ultrarapid mixing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

A kinetic folding intermediate probed by native state hydrogen exchange

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

An amino acid code for protein folding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Effective energy function for proteins in solution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

A structural comparison of the colicin immunity proteins Im7 and Im9 gives new insights into the molecular determinants of immunity-protein specificity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Molecular picture of folding of a small alpha/beta protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Structure-based calculation of the equilibrium folding pathway of proteins. Correlation with hydrogen exchange protection factors.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

1H, 13C and 15N chemical shift referencing in biomolecular NMR

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Equilibrium hydrogen exchange reveals extensive hydrogen bonded secondary structure in the on-pathway intermediate of Im7.

6 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Beyond the EX1 limit: probing the structure of high-energy states in protein unfolding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Ultrarapid mixing experiments reveal that Im7 folds via an on-pathway intermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Rare fluctuations of native proteins sampled by equilibrium hydrogen exchange.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Correlation between native-state hydrogen exchange and cooperative residue fluctuations from a simple model

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Ultraviolet resonance Raman studies reveal the environment of tryptophan and tyrosine residues in the native and partially folded states of the E colicin-binding immunity protein Im7.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Im7 folding mechanism: misfolding on a path to the native state

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Latent and active p53 are identical in conformation

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Strategy for analysing the co-operativity of intramolecular interactions in peptides and proteins

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16371468

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Conformational dynamics of cytochrome c: correlation to hydrogen exchange

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16371468

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0508667102

1 reference

31 July 2017

0 references

1 reference

31 July 2017

1 reference