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3'LIFE: a functional assay to detect miRNA targets in high-throughput
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Europe PubMed Central
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4176154
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11 March 2020
title
3'LIFE: a functional assay to detect miRNA targets in high-throughput
(English)
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Europe PubMed Central
PMCID
4176154
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25074381%20AND%20SRC:MED&resulttype=core&format=json
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11 March 2020
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Justin M Wolter
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1
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Europe PubMed Central
PMCID
4176154
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25074381%20AND%20SRC:MED&resulttype=core&format=json
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11 March 2020
Kasuen Kotagama
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4176154
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25074381%20AND%20SRC:MED&resulttype=core&format=json
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11 March 2020
Marco Mangone
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5
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4176154
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11 March 2020
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Alexandra C Pierre-Bez
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3
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4176154
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11 March 2020
Mari Firago
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4
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Europe PubMed Central
PMCID
4176154
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11 March 2020
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English
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publication date
29 July 2014
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4176154
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11 March 2020
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Nucleic Acids Research
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4176154
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11 March 2020
volume
42
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11 March 2020
issue
17
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4176154
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11 March 2020
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e132
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11 March 2020
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3 May 2017
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MicroRNAs: target recognition and regulatory functions
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Most mammalian mRNAs are conserved targets of microRNAs
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A SNP in a let-7 microRNA complementary site in the KRAS 3' untranslated region increases non-small cell lung cancer risk
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
A construct with fluorescent indicators for conditional expression of miRNA.
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
Widespread changes in protein synthesis induced by microRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
The impact of microRNAs on protein output
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stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Id1 cooperates with oncogenic Ras to induce metastatic mammary carcinoma by subversion of the cellular senescence response
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
An elaborate pathway required for Ras-mediated epigenetic silencing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Tumour invasion and metastasis initiated by microRNA-10b in breast cancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
Heat shock factor 1 is a powerful multifaceted modifier of carcinogenesis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
Determinants of targeting by endogenous and exogenous microRNAs and siRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
Clustal W and Clustal X version 2.0
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
MicroRNA targeting specificity in mammals: determinants beyond seed pairing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
Let-7 expression defines two differentiation stages of cancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Isolation of microRNA targets by miRNP immunopurification
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
The evolution of gene regulation by transcription factors and microRNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
Direct and indirect effects of retinoic acid on human Th2 cytokine and chemokine expression by human T lymphocytes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
Coactivator as a target gene specificity determinant for histone H3 lysine 4 methyltransferases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Relief of microRNA-mediated translational repression in human cells subjected to stress
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
Oncomirs - microRNAs with a role in cancer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Overexpression of RARgamma increases death of SH-SY5Y neuroblastoma cells in response to retinoic acid but not fenretinide
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
The widespread impact of mammalian MicroRNAs on mRNA repression and evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Ha-ras(val12) induces HSP70b transcription via the HSE/HSF1 system, but HSP70b expression is suppressed in Ha-ras(val12)-transformed cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Micro-RNA regulation of the mammalian lin-28 gene during neuronal differentiation of embryonal carcinoma cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Oncogenes and Angiogenesis: down-regulation of thrombospondin-1 in normal fibroblasts exposed to factors from cancer cells harboring mutant ras.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Combinatorial microRNA target predictions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
RAS is regulated by the let-7 microRNA family
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Computational analysis of 3'-ends of ESTs shows four classes of alternative polyadenylation in human, mouse, and rat
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
All-trans retinoic acid-responsive genes identified in the human SH-SY5Y neuroblastoma cell line and their regulated expression in the nervous system of early embryos
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
WebLogo: A Sequence Logo Generator
1 reference
stated in
PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Reduced expression of the let-7 microRNAs in human lung cancers in association with shortened postoperative survival
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
RARgamma acts as a tumor suppressor in mouse keratinocytes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
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6 July 2018
MicroRNAs: genomics, biogenesis, mechanism, and function
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Prediction of mammalian microRNA targets
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Interaction and functional cooperation of the cancer-amplified transcriptional coactivator activating signal cointegrator-2 and E2F-1 in cell proliferation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Activating signal cointegrator 2 belongs to a novel steady-state complex that contains a subset of trithorax group proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
STAT6 mediates interleukin-4 growth inhibition in human breast cancer cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
A functional screen identifies hDRIL1 as an oncogene that rescues RAS-induced senescence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Suppression of cell spreading by v-Crk requires Ras-MEK-MAP kinase signaling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Transcriptional activation by STAT6 requires the direct interaction with NCoA-1
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Crk activation of JNK via C3G and R-Ras
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Specific activation of retinoic acid receptors (RARs) and retinoid X receptors reveals a unique role for RARgamma in induction of differentiation and apoptosis of S91 melanoma cells
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
RNA recognition by the human polyadenylation factor CstF
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Mitogen-activated protein kinase acts as a negative regulator of the heat shock response in NIH3T3 cells.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
6 July 2018
Oncogenic potential of retinoic acid receptor-gamma in hepatocellular carcinoma
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
28 October 2018
Retinoic acid is both necessary for and inhibits myogenic commitment and differentiation in the chick limb
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
28 October 2018
Retinoic acid in development: towards an integrated view
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
28 October 2018
A noncommercial dual luciferase enzyme assay system for reporter gene analysis
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176154
retrieved
28 October 2018
All-trans retinoic acid induces different immunophenotypic changes on human HL60 and NB4 myeloid leukaemias
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25074381
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/GKU626
1 reference
stated in
Europe PubMed Central
PMCID
4176154
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25074381%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
PMCID
4176154
1 reference
stated in
Europe PubMed Central
PMCID
4176154
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25074381%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
PubMed ID
25074381
1 reference
stated in
Europe PubMed Central
PMCID
4176154
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25074381%20AND%20SRC:MED&resulttype=core&format=json
retrieved
11 March 2020
ResearchGate publication ID
264433686
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