(Q34292157)

1 August 2017

Microbiome and immunological interactions (English)

1 reference

1 August 2017

0 references

Denise Kelly

1

1 reference

PubMed ID

22861803

1 August 2017

Imke E Mulder

series ordinal

2

1 reference

1 August 2017

1 August 2012

1 reference

1 August 2017

1 reference

1 August 2017

70 Suppl 1

1 reference

1 August 2017

S18-30

1 reference

TheViral MetaGenome Annotation Pipeline(VMGAP):an automated tool for the functional annotation of viral Metagenomic shotgun sequencing data

1 August 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Abundance and diversity of mucosa-associated hydrogenotrophic microbes in the healthy human colon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Diversity of the autochthonous colonic microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Development of the human gastrointestinal microbiota and insights from high-throughput sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Environmentally-acquired bacteria influence microbial diversity and natural innate immune responses at gut surfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Development of the human infant intestinal microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Unravelling the effects of the environment and host genotype on the gut microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Succession of microbial consortia in the developing infant gut microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

A human gut microbial gene catalogue established by metagenomic sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Diversity of the human intestinal microbial flora

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Enhanced Escherichia coli adherence and invasion in Crohn's disease and colon cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

The role of microbes in Crohn's disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

The human gut microbiome: ecology and recent evolutionary changes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Obesity alters gut microbial ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

A core gut microbiome in obese and lean twins

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

An obesity-associated gut microbiome with increased capacity for energy harvest

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Energy-balance studies reveal associations between gut microbes, caloric load, and nutrient absorption in humans

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Arabinoxylans and inulin differentially modulate the mucosal and luminal gut microbiota and mucin-degradation in humanized rats.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Comparison of the gut microbiotas of healthy adult twins living in South Korea and the United States

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Human nutrition, the gut microbiome and the immune system

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Molecular analysis of the gut microbiota of identical twins with Crohn's disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Organismal, genetic, and transcriptional variation in the deeply sequenced gut microbiomes of identical twins

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

A pyrosequencing study in twins shows that gastrointestinal microbial profiles vary with inflammatory bowel disease phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Intestinal mucosal barrier function in health and disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Expression of heparan sulfate proteoglycans in murine models of experimental colitis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

The human commensal Bacteroides fragilis binds intestinal mucin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Effect of lactation on the decline of brush border lactase activity in neonatal pigs

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Regulation of N-glycolylneuraminic acid biosynthesis in developing pig small intestine

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Genome analysis of Bifidobacterium bifidum PRL2010 reveals metabolic pathways for host-derived glycan foraging

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Structure of a SusD Homologue, BT1043, Involved in Mucin O -Glycan Utilization in a Prominent Human Gut Symbiont † , ‡

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Loss of intestinal core 1-derived O-glycans causes spontaneous colitis in mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Homeostatic impact of indigenous microbiota and secretory immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Roles of B-1 and B-2 cells in innate and acquired IgA-mediated immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Aberrant expansion of segmented filamentous bacteria in IgA-deficient gut

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Secreted enteric antimicrobial activity localises to the mucus surface layer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Enteric defensins are essential regulators of intestinal microbial ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

How bugs and men live in harmony. Role of defensins in gut microbial composition and Th17 development

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Paneth cell defensins and the regulation of the microbiome: détente at mucosal surfaces

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Recognition of microbial infection by Toll-like receptors

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Nods, Nalps and Naip: intracellular regulators of bacterial-induced inflammation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

The interleukin-1 receptor/Toll-like receptor superfamily: 10 years of progress.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Differential alteration in intestinal epithelial cell expression of toll-like receptor 3 (TLR3) and TLR4 in inflammatory bowel disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Decreased expression of Toll-like receptor-4 and MD-2 correlates with intestinal epithelial cell protection against dysregulated proinflammatory gene expression in response to bacterial lipopolysaccharide

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Toll-like receptor 4-mediated signaling by epithelial surfaces: necessity or threat?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Intestinal epithelial TOLLerance versus inTOLLerance of commensals

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Salmonella typhimurium translocates flagellin across intestinal epithelia, inducing a proinflammatory response

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Commensal-associated molecular patterns induce selective toll-like receptor-trafficking from apical membrane to cytoplasmic compartments in polarized intestinal epithelium

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Structural characterization of the lipid A component of Bacteroides fragilis strain NCTC 9343 lipopolysaccharide

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Toll-like receptor 5 recognizes a conserved site on flagellin required for protofilament formation and bacterial motility

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Evasion of Toll-like receptor 5 by flagellated bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Helicobacter pylori flagellin evades toll-like receptor 5-mediated innate immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Recognition of commensal microflora by toll-like receptors is required for intestinal homeostasis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Constitutive activation of epithelial TLR4 augments inflammatory responses to mucosal injury and drives colitis-associated tumorigenesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Toll-like receptors in inflammatory bowel diseases: a decade later

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Flagellin treatment protects against chemicals, bacteria, viruses, and radiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Toll-like receptor signalling in the intestinal epithelium: how bacterial recognition shapes intestinal function.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

TLRs in the Gut. IV. Negative regulation of Toll-like receptors and intestinal homeostasis: addition by subtraction

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

A20 is an early responding negative regulator of Toll-like receptor 5 signalling in intestinal epithelial cells during inflammation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Ubiquitin-editing enzyme A20 promotes tolerance to lipopolysaccharide in enterocytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Enterocyte-specific A20 deficiency sensitizes to tumor necrosis factor-induced toxicity and experimental colitis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

A20 is an antigen presentation attenuator, and its inhibition overcomes regulatory T cell-mediated suppression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

The ubiquitin-editing protein A20 prevents dendritic cell activation, recognition of apoptotic cells, and systemic autoimmunity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

The yopJ locus is required for Yersinia-mediated inhibition of NF-kappaB activation and cytokine expression: YopJ contains a eukaryotic SH2-like domain that is essential for its repressive activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Cutting edge: Salmonella AvrA effector inhibits the key proinflammatory, anti-apoptotic NF-kappa B pathway.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

IKK beta and phosphatidylinositol 3-kinase/Akt participate in non-pathogenic Gram-negative enteric bacteria-induced RelA phosphorylation and NF-kappa B activation in both primary and intestinal epithelial cell lines

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Commensal anaerobic gut bacteria attenuate inflammation by regulating nuclear-cytoplasmic shuttling of PPAR-gamma and RelA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Prokaryotic regulation of epithelial responses by inhibition of IkappaB-alpha ubiquitination.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Bacterial inhibition of eukaryotic pro-inflammatory pathways

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Neisseria lactamica attenuates TLR-1/2-induced cytokine responses in nasopharyngeal epithelial cells using PPAR-γ.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Enterococcus faecalis from newborn babies regulate endogenous PPARgamma activity and IL-10 levels in colonic epithelial cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Vitamin D receptor negatively regulates bacterial-stimulated NF-kappaB activity in intestine

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Balancing inflammatory, lipid, and xenobiotic signaling pathways by VSL#3, a biotherapeutic agent, in the treatment of inflammatory bowel disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Probiotics modulate intestinal expression of nuclear receptor and provide counter-regulatory signals to inflammation-driven adipose tissue activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Bacteria-free solution derived from Lactobacillus plantarum inhibits multiple NF-kappaB pathways and inhibits proteasome function

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Inhibition of the NF-kappaB pathway in human intestinal epithelial cells by commensal Streptococcus salivarius

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Identification of NF-κB modulation capabilities within human intestinal commensal bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Selective generation of gut tropic T cells in gut-associated lymphoid tissue (GALT): requirement for GALT dendritic cells and adjuvant.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Dendritic cells express tight junction proteins and penetrate gut epithelial monolayers to sample bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Intestinal villous M cells: an antigen entry site in the mucosal epithelium

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Functional specialization of gut CD103+ dendritic cells in the regulation of tissue-selective T cell homing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Intestinal CD103+, but not CX3CR1+, antigen sampling cells migrate in lymph and serve classical dendritic cell functions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Functional specializations of intestinal dendritic cell and macrophage subsets that control Th17 and regulatory T cell responses are dependent on the T cell/APC ratio, source of mouse strain, and regional localization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Division of labor, plasticity, and crosstalk between dendritic cell subsets.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Recognition of microorganisms and activation of the immune response

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

A functionally specialized population of mucosal CD103+ DCs induces Foxp3+ regulatory T cells via a TGF-beta and retinoic acid-dependent mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Intestinal CD103+ dendritic cells: master regulators of tolerance?

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Intestinal Tolerance Requires Gut Homing and Expansion of FoxP3+ Regulatory T Cells in the Lamina Propria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Intestinal epithelial cells promote colitis-protective regulatory T-cell differentiation through dendritic cell conditioning.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Immune regulation in the intestine: a balancing act between effector and regulatory T cell responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Induction of intestinal Th17 cells by segmented filamentous bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

The key role of segmented filamentous bacteria in the coordinated maturation of gut helper T cell responses

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Induction of colonic regulatory T cells by indigenous Clostridium species

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Reduced diversity of faecal microbiota in Crohn's disease revealed by a metagenomic approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Gut-residing segmented filamentous bacteria drive autoimmune arthritis via T helper 17 cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Proinflammatory T-cell responses to gut microbiota promote experimental autoimmune encephalomyelitis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Commensal microbiota and myelin autoantigen cooperate to trigger autoimmune demyelination.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Central nervous system demyelinating disease protection by the human commensal Bacteroides fragilis depends on polysaccharide A expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Role of probiotic therapy in IBD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

The 'hygiene hypothesis' for autoimmune and allergic diseases: an update

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Bioconductor: open software development for computational biology and bioinformatics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Assessing quality and completeness of human transcriptional regulatory pathways on a genome-wide scale

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Bioinformatics applications for pathway analysis of microarray data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

DAVID: Database for Annotation, Visualization, and Integrated Discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

NCBI GEO: archive for functional genomics data sets--10 years on

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

The Human Microbiome Project in 2011 and beyond

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Assembly of the human intestinal microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Metagenomic analysis of the human distal gut microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Enterotypes of the human gut microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Moving pictures of the human microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

Reduction of disulphide bonds unmasks potent antimicrobial activity of human β-defensin 1

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

VSL#3 Probiotic-Mixture Induces Remission in Patients with Active Ulcerative Colitis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1753-4887.2012.00498.X

10.1111/J.1753-4887.2012.00498.X

21 January 2018

Identifiers

DOI

1 reference

1 August 2017

1 reference

PubMed ID

22861803