(Q34314596)

English

EcoGene 3.0.

scientific article

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

EcoGene 3.0. (English)

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Europe PubMed Central

PubMed publication ID

1 August 2017

author name string

Jindan Zhou

1

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

Kenneth E Rudd

2

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

language of work or name

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publication date

28 November 2012

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

Nucleic Acids Research

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Europe PubMed Central

PubMed publication ID

1 August 2017

41

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Europe PubMed Central

PubMed publication ID

1 August 2017

Database issue

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Europe PubMed Central

PubMed publication ID

1 August 2017

D613-24

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Europe PubMed Central

PubMed publication ID

1 August 2017

copyright license

Creative Commons Attribution-NonCommercial 3.0 Unported

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Mining GO annotations for improving annotation consistency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Database resources of the National Center for Biotechnology Information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

The UniProt-GO Annotation database in 2011.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Newly identified genetic variations in common Escherichia coli MG1655 stock cultures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

YhiQ is RsmJ, the methyltransferase responsible for methylation of G1516 in 16S rRNA of E. coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

EcoliWiki: a wiki-based community resource for Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

COMBREX: COMputational BRidge to EXperiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Genotype and phenotypes of an intestine-adapted Escherichia coli K-12 mutant selected by animal passage for superior colonization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

IS5 inserts upstream of the master motility operon flhDC in a quasi-Lamarckian way.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

COMBREX: a project to accelerate the functional annotation of prokaryotic genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

EcoCyc: a comprehensive database of Escherichia coli biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Update on the Keio collection of Escherichia coli single-gene deletion mutants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

REBASE--a database for DNA restriction and modification: enzymes, genes and genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Small stress response proteins in Escherichia coli: proteins missed by classical proteomic studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

What we can learn about Escherichia coli through application of Gene Ontology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Small membrane proteins found by comparative genomics and ribosome binding site models.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

AmiGO: online access to ontology and annotation data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Repression of small toxic protein synthesis by the Sib and OhsC small RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

The impact of horizontal gene transfer in shaping operons and protein interaction networks--direct evidence of preferential attachment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Escherichia coli K-12: a cooperatively developed annotation snapshot--2005

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

ASAP: a resource for annotating, curating, comparing, and disseminating genomic data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Increased motility of Escherichia coli by insertion sequence element integration into the regulatory region of the flhD operon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Gene ontology: tool for the unification of biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Novel intergenic repeats of Escherichia coli K-12

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

EcoGene: a genome sequence database for Escherichia coli K-12.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Linkage map of Escherichia coli K-12, edition 10: the physical map.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

The complete genome sequence of Escherichia coli K-12

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Intrinsic and extrinsic approaches for detecting genes in a bacterial genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Detection of new genes in a bacterial genome using Markov models for three gene classes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

The physical map of the whole E. coli chromosome: application of a new strategy for rapid analysis and sorting of a large genomic library

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

An algorithm for searching restriction maps.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Mapping sequenced E.coli genes by computer: software, strategies and examples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531124

6 July 2018

Significant dispersed recurrent DNA sequences in the Escherichia coli genome. Several new groups.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1235

21 January 2018

Reorganizing the protein space at the Universal Protein Resource (UniProt)

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1235

21 January 2018

Bacterial genome reengineering.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1235

21 January 2018

Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1235

21 January 2018

Hda monomerization by ADP binding promotes replicase clamp-mediated DnaA-ATP hydrolysis.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1235

21 January 2018

Low molecular weight proteins: a challenge for post-genomic research.

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1235

21 January 2018

Identifiers

10.1093/NAR/GKS1235

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

DBLP publication ID

journals/nar/ZhouR13

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

ResearchGate publication ID

0 references

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