(Q34320884)

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The population genomics of a fast evolver: high levels of diversity, functional constraint, and molecular adaptation in the tunicate Ciona intestinalis

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scholarly article

1 reference

Europe PubMed Central

1 August 2017

The population genomics of a fast evolver: high levels of diversity, functional constraint, and molecular adaptation in the tunicate Ciona intestinalis (English)

1 reference

Europe PubMed Central

1 August 2017

0 references

Ciona intestinalis

1 reference

based on heuristic

inferred from title

author name string

Georgia Tsagkogeorga

1

1 reference

Europe PubMed Central

1 August 2017

Vincent Cahais

2

1 reference

Europe PubMed Central

1 August 2017

Nicolas Galtier

3

1 reference

Europe PubMed Central

1 August 2017

publication date

28 June 2012

1 reference

Europe PubMed Central

1 August 2017

Genome Biology and Evolution

1 reference

Europe PubMed Central

1 August 2017

4

1 reference

Europe PubMed Central

1 August 2017

8

1 reference

Europe PubMed Central

1 August 2017

740-749

1 reference

Europe PubMed Central

1 August 2017

Reference-free transcriptome assembly in non-model animals from next-generation sequencing data.

1 reference

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Evidence for widespread positive and purifying selection across the European rabbit (Oryctolagus cuniculus) genome

1 reference

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Are there laws of genome evolution?

1 reference

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Inference of site frequency spectra from high-throughput sequence data: quantification of selection on nonsynonymous and synonymous sites in humans

1 reference

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Next-generation sequencing of transcriptomes: a guide to RNA isolation in nonmodel animals.

1 reference

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Acoelomorph flatworms are deuterostomes related to Xenoturbella

1 reference

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Reproductive protein evolution in two cryptic species of marine chordate

1 reference

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Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate

1 reference

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Invasion genetics of the Ciona intestinalis species complex: from regional endemism to global homogeneity

1 reference

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Computational analysis of whole-genome differential allelic expression data in human

1 reference

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Polymorphism and divergence within the ascidian genus Ciona

1 reference

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Genome wide analyses reveal little evidence for adaptive evolution in many plant species.

1 reference

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Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags

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Evidence for pervasive adaptive protein evolution in wild mice

1 reference

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Tunicate mitogenomics and phylogenetics: peculiarities of the Herdmania momus mitochondrial genome and support for the new chordate phylogeny

1 reference

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An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models

1 reference

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Bilaterian phylogeny: a broad sampling of 13 nuclear genes provides a new Lophotrochozoa phylogeny and supports a paraphyletic basal acoelomorpha

1 reference

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Estimating the rate of adaptive molecular evolution in the presence of slightly deleterious mutations and population size change

1 reference

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Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

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6 July 2018

Why do species vary in their rate of molecular evolution?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3509891

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Estimation of allele frequencies from high-coverage genome-sequencing projects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3509891

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Additional molecular support for the new chordate phylogeny

1 reference

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6 July 2018

Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations.

1 reference

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The cellular, developmental and population-genetic determinants of mutation-rate evolution

1 reference

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The amphioxus genome and the evolution of the chordate karyotype

1 reference

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Assessing the evolutionary impact of amino acid mutations in the human genome

1 reference

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Broad phylogenomic sampling improves resolution of the animal tree of life

1 reference

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Life-history traits drive the evolutionary rates of mammalian coding and noncoding genomic elements

1 reference

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Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans

1 reference

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Accumulation of slightly deleterious mutations in mitochondrial protein-coding genes of large versus small mammals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3509891

6 July 2018

Mitogenomics reveals two cryptic species in Ciona intestinalis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3509891

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Cryptic speciation in a model invertebrate chordate

1 reference

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A haplome alignment and reference sequence of the highly polymorphic Ciona savignyi genome

1 reference

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Suppression of long-branch attraction artefacts in the animal phylogeny using a site-heterogeneous model

1 reference

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Deuterostome phylogeny reveals monophyletic chordates and the new phylum Xenoturbellida

1 reference

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Bio++: a set of C++ libraries for sequence analysis, phylogenetics, molecular evolution and population genetics

1 reference

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Tunicates and not cephalochordates are the closest living relatives of vertebrates

1 reference

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Natural selection on protein-coding genes in the human genome

1 reference

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Why highly expressed proteins evolve slowly

1 reference

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1 reference

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1 reference

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The Ciona intestinalis genome: when the constraints are off.

1 reference

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1 reference

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The Draft Genome of Ciona intestinalis: Insights into Chordate and Vertebrate Origins

1 reference

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1 reference

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Positive and negative selection on the human genome

1 reference

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Mechanisms of molecular evolution

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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The genomic rate of adaptive amino acid substitution in Drosophila.

1 reference

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21 January 2018

Strong variations of mitochondrial mutation rate across mammals--the longevity hypothesis

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVS054

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Introgression despite substantial divergence in a broadcast spawning marine invertebrate.

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVS054

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A generation time effect on the rate of molecular evolution in invertebrates.

1 reference

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Accelerated Evolutionary Rate of Housekeeping Genes in Tunicates

1 reference

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Topological estimation biases with covarion evolution.

1 reference

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2 references

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28 October 2018

Identifiers

10.1093/GBE/EVS054

1 reference

Europe PubMed Central

1 August 2017

1 reference

Europe PubMed Central

1 August 2017

1 reference

Europe PubMed Central

1 August 2017

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