(Q34376746)

1 August 2017

title

Environmental factors affect Acidobacterial communities below the subgroup level in grassland and forest soils (English)

1 reference

1 August 2017

0 references

1 reference

8

Yvonne Oelmann

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Swen C. Renner

Swen Renner

16

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Konstans Wells

Konstans Wells

19

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Ingo Schöning

Ingo Schöning

17

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Michael Bonkowski

Michael Bonkowski

6

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Michael W. Friedrich

Michael W Friedrich

22

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Andrea Polle

Andrea Polle

9

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Karl Eduard Linsenmair

Karl Eduard Linsenmair

14

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Wolfgang Weisser

Wolfgang W Weisser

18

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Bärbel U Foesel

2

Bärbel U Foesel

1 reference

1 August 2017

21

Jörg Overmann

1 reference

1 August 2017

7

Fabian Alt

1 reference

1 August 2017

20

Markus Fischer

1 reference

1 August 2017

13

Elisabeth K V Kalko

1 reference

1 August 2017

11

Sonja Gockel

1 reference

1 August 2017

12

Andreas Hemp

1 reference

1 August 2017

Astrid Naether

1

1 reference

1 August 2017

Verena Naegele

3

1 reference

1 August 2017

Pia K Wüst

4

1 reference

1 August 2017

Jan Weinert

5

1 reference

1 August 2017

Gertrud Lohaus

10

1 reference

1 August 2017

Simone Pfeiffer

15

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1 August 2017

language of work or name

English

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publication date

10 August 2012

1 reference

Applied and Environmental Microbiology

1 August 2017

published in

1 reference

1 August 2017

volume

78

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1 August 2017

issue

20

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1 August 2017

page(s)

7398-7406

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The bacterial biogeography of British soils.

1 August 2017

cites work

1 reference

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Pyrosequencing-based assessment of bacterial community structure along different management types in German forest and grassland soils

6 July 2018

1 reference

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Seasonality and resource availability control bacterial and archaeal communities in soils of a temperate beech forest

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Horizon-specific bacterial community composition of German grassland soils, as revealed by pyrosequencing-based analysis of 16S rRNA genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Soil microbial community responses to multiple experimental climate change drivers

6 July 2018

1 reference

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T-REX: software for the processing and analysis of T-RFLP data

6 July 2018

1 reference

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Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils

6 July 2018

1 reference

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A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses

6 July 2018

1 reference

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Phylogenetic diversity of Acidobacteria in a former agricultural soil

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Phylocom: software for the analysis of phylogenetic community structure and trait evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Comparative analysis of genome fragments of Acidobacteria from deep Mediterranean plankton

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Vegetation cover of forest, shrub and pasture strongly influences soil bacterial community structure as revealed by 16S rRNA gene T-RFLP analysis.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Differences in vegetation composition and plant species identity lead to only minor changes in soil-borne microbial communities in a former arable field

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Diversity and in situ quantification of Acidobacteria subdivision 1 in an acidic mining lake

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Environmental controls on the landscape-scale biogeography of stream bacterial communities

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Multivariate analyses in microbial ecology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Effects of plant biomass, plant diversity, and water content on bacterial communities in soil lysimeters: implications for the determinants of bacterial diversity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Toward an ecological classification of soil bacteria.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Acidobacteria phylum sequences in uranium-contaminated subsurface sediments greatly expand the known diversity within the phylum

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Isolation and characterization of soil bacteria that define Terriglobus gen. nov., in the phylum Acidobacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Influence of plant diversity and elevated atmospheric carbon dioxide levels on belowground bacterial diversity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Statistical methods for characterizing diversity of microbial communities by analysis of terminal restriction fragment length polymorphisms of 16S rRNA genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Phylogenetic analysis and in situ identification of bacteria community composition in an acidic Sphagnum peat bog

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Application of a newly developed ARB software-integrated tool for in silico terminal restriction fragment length polymorphism analysis reveals the dominance of a novel pmoA cluster in a forest soil.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Bacterial community structure and diversity in a century-old manure-treated agroecosystem.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Bellerophon: a program to detect chimeric sequences in multiple sequence alignments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

ARB: a software environment for sequence data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Formation of pseudo-terminal restriction fragments, a PCR-related bias affecting terminal restriction fragment length polymorphism analysis of microbial community structure

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Effects of above-ground plant species composition and diversity on the diversity of soil-borne microorganisms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

The Structure of Microbial Communities in Soil and the Lasting Impact of Cultivation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Archaeal population dynamics during sequential reduction processes in rice field soil

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Molecular analyses of the methane-oxidizing microbial community in rice field soil by targeting the genes of the 16S rRNA, particulate methane monooxygenase, and methanol dehydrogenase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Wide distribution and diversity of members of the bacterial kingdom Acidobacterium in the environment

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Novel division level bacterial diversity in a Yellowstone hot spring

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Diverse uncultivated bacterial groups from soils of the arid southwestern United States that are present in many geographic regions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Detection and in situ identification of representatives of a widely distributed new bacterial phylum

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Group-specific PCR primers for the phylum Acidobacteria designed based on the comparative analysis of 16S rRNA gene sequences.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

In situ detection of novel Acidobacteria in microbial mats from a chemolithoautotrophically based cave ecosystem (Lower Kane Cave, WY, USA).

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Bacterial communities in Arctic fjelds of Finnish Lapland are stable but highly pH-dependent

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3457104

T-Align, a web-based tool for comparison of multiple terminal restriction fragment length polymorphism profiles

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22885760

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/AEM.01325-12

1 reference

1 August 2017

1 reference

1 August 2017

1 reference