(Q34414704)

English

Disentangling evolutionary signals: conservation, specificity determining positions and coevolution. Implication for catalytic residue prediction

scientific article

In more languages

default for all languages

No label defined

No description defined

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

Disentangling evolutionary signals: conservation, specificity determining positions and coevolution. Implication for catalytic residue prediction (English)

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

0 references

object named as

Elin Teppa

1

0 references

object named as

Morten Nielsen

3

0 references

author name string

Angela D Wilkins

2

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

Cristina Marino Buslje

4

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

publication date

14 September 2012

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

BMC Bioinformatics

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

13

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

235

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

Networks of high mutual information define the structural proximity of catalytic sites: implications for catalytic residue identification.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

Evolution-guided discovery and recoding of allosteric pathway specificity determinants in psychoactive bioamine receptors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

NetCTLpan: pan-specific MHC class I pathway epitope predictions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

The Pfam protein families database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

Ensemble approach to predict specificity determinants: benchmarking and validation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

Coevolution in defining the functional specificity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

Characterization and prediction of residues determining protein functional specificity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

Multi-RELIEF: a method to recognize specificity determining residues from multiple sequence alignments using a Machine-Learning approach for feature weighting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

Automated protein subfamily identification and classification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

Sequence comparison by sequence harmony identifies subtype-specific functional sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

ET viewer: an application for predicting and visualizing functional sites in protein structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

A family of evolution-entropy hybrid methods for ranking protein residues by importance.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

T-Coffee: A novel method for fast and accurate multiple sequence alignment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

Identification of class-determining residues in G protein-coupled receptors by sequence analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

An evolutionary trace method defines binding surfaces common to protein families

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

A method to predict functional residues in proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3515339

6 July 2018

Analysis and prediction of functional sub-types from protein sequence alignments.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-235

21 January 2018

Bayesian search of functionally divergent protein subgroups and their function specific residues.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-235

21 January 2018

Prediction of functional specificity determinants from protein sequences using log-likelihood ratios

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-235

21 January 2018

Tracing evolutionary pressure

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-235

21 January 2018

INTREPID--INformation-theoretic TREe traversal for Protein functional site IDentification

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-235

21 January 2018

Phylogeny-independent detection of functional residues

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-235

21 January 2018

Automated selection of positions determining functional specificity of proteins by comparative analysis of orthologous groups in protein families.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2105-13-235

21 January 2018

Automatic methods for predicting functionally important residues

1 reference

https://pubmed.ncbi.nlm.nih.gov/22978315

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Secator: a program for inferring protein subfamilies from phylogenetic trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/22978315

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2105-13-235

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

DBLP publication ID

journals/bmcbi/TeppaWNB12

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q34414704&oldid=2196603641"