(Q34434107)

2 August 2017

title

Automated genome mining of ribosomal peptide natural products (English)

1 reference

2 August 2017

0 references

1 reference

Samuel O Purvine

5

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Bradley S. Moore

object named as

Bradley S Moore

10

0 references

Mingxun Wang

4

object named as

Mingxun Wang

1 reference

2 August 2017

12

Pieter C Dorrestein

1 reference

2 August 2017

8

Ljiljana Pasa-Tolic

1 reference

2 August 2017

2

Roland D Kersten

1 reference

2 August 2017

9

Nuno Bandeira

1 reference

2 August 2017

1

Hosein Mohimani

1 reference

2 August 2017

11

Pavel A Pevzner

1 reference

2 August 2017

Wei-Ting Liu

3

1 reference

2 August 2017

Si Wu

6

1 reference

2 August 2017

Heather M Brewer

7

1 reference

2 August 2017

publication date

23 May 2014

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2 August 2017

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2 August 2017

volume

9

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2 August 2017

issue

7

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2 August 2017

page(s)

1545-1551

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

2 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

MS/MS networking guided analysis of molecule and gene cluster families.

6 July 2018

1 reference

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BAGEL3: Automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

A new approach to evaluating statistical significance of spectral identifications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Mass spectral molecular networking of living microbial colonies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

A mass spectrometry-guided genome mining approach for natural product peptidogenomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Cycloquest: identification of cyclopeptides via database search of their mass spectra against genome databases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Genomics-inspired discovery of natural products

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Genome mining for ribosomally synthesized natural products

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Missing genes in the annotation of prokaryotic genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Identification of a novel two-peptide lantibiotic, lichenicidin, following rational genome mining for LanM proteins.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Strategies for the discovery of new natural products by genome mining

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Fully automated four-column capillary LC-MS system for maximizing throughput in proteomic analyses.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Lantibiotics: peptides of diverse structure and function.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Protein identification by spectral networks analysis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Chemically etched open tubular and monolithic emitters for nanoelectrospray ionization mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Discovery and in vitro biosynthesis of haloduracin, a two-component lantibiotic

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Identification of post-translational modifications by blind search of mass spectra.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

PepNovo: de novo peptide sequencing via probabilistic network modeling

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

The SapB morphogen is a lantibiotic-like peptide derived from the product of the developmental gene ramS in Streptomyces coelicolor.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

AmfS, an extracellular peptidic morphogen in Streptomyces griseus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Efficiency of database search for identification of mutated and modified proteins via mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Probability-based protein identification by searching sequence databases using mass spectrometry data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Involvement and unusual substrate specificity of a prolyl oligopeptidase in class III lanthipeptide maturation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Characterization of new class III lantibiotics--erythreapeptin, avermipeptin and griseopeptin from Saccharopolyspora erythraea, Streptomyces avermitilis and Streptomyces griseus demonstrates stepwise N-terminal leader processing.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Labyrinthopeptins: a new class of carbacyclic lantibiotics

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Interpreting top-down mass spectra using spectral alignment.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

Mutation-tolerant protein identification by mass spectrometry

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215869

The pros and cons of peptide-centric proteomics

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24802639

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Telomere length in early life predicts lifespan.

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1021/CB500199H

Genotype-phenotype correlation in 1,507 families with congenital adrenal hyperplasia owing to 21-hydroxylase deficiency

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1021/CB500199H

Identifiers

DOI

10.1021/CB500199H

1 reference

2 August 2017

1 reference

2 August 2017

1 reference