(Q42779012)

English

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

scientific article published on 14 June 2011

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scholarly article

1 reference

Europe PubMed Central

7 November 2017

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences (English)

1 reference

Europe PubMed Central

7 November 2017

secondary metabolite

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based on heuristic

inferred from title

Marnix H Medema

1

1 reference

Europe PubMed Central

7 November 2017

8

1 reference

Europe PubMed Central

7 November 2017

Rainer Breitling

9

1 reference

Europe PubMed Central

7 November 2017

Victor de Jager

4

object named as

Victor de Jager

1 reference

Europe PubMed Central

7 November 2017

object named as

Kai Blin

2

0 references

Michael A. Fischbach

object named as

Michael A Fischbach

6

0 references

author name string

Peter Cimermancic

3

1 reference

Europe PubMed Central

7 November 2017

Piotr Zakrzewski

5

1 reference

Europe PubMed Central

7 November 2017

Tilmann Weber

7

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Europe PubMed Central

7 November 2017

language of work or name

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publication date

14 June 2011

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Europe PubMed Central

7 November 2017

Nucleic Acids Research

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Europe PubMed Central

7 November 2017

39

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Europe PubMed Central

7 November 2017

W339-46

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Europe PubMed Central

7 November 2017

Web Server issue

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Europe PubMed Central

7 November 2017

copyright license

Creative Commons Attribution-NonCommercial 3.0 Unported

14 November 2016

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April 2022 Public Data File from Crossref

copyright status

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NRPSpredictor2--a web server for predicting NRPS adenylation domain specificity

1 reference

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27 May 2018

SMURF: Genomic mapping of fungal secondary metabolite clusters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125804

27 May 2018

BAGEL2: mining for bacteriocins in genomic data

1 reference

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27 May 2018

SBSPKS: structure based sequence analysis of polyketide synthases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125804

27 May 2018

FastTree 2--approximately maximum-likelihood trees for large alignments

1 reference

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27 May 2018

Natural products version 2.0: connecting genes to molecules.

1 reference

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27 May 2018

TreeGraph 2: Combining and visualizing evidence from different phylogenetic analyses

1 reference

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The Pfam protein families database

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Automated genome mining for natural products.

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Towards prediction of metabolic products of polyketide synthases: an in silico analysis

1 reference

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27 May 2018

SMART 6: recent updates and new developments

1 reference

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27 May 2018

ClustScan: an integrated program package for the semi-automatic annotation of modular biosynthetic gene clusters and in silico prediction of novel chemical structures

1 reference

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27 May 2018

In silico analysis of methyltransferase domains involved in biosynthesis of secondary metabolites

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27 May 2018

The evolution of gene collectives: How natural selection drives chemical innovation.

1 reference

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27 May 2018

Phylogenetic analysis of condensation domains in NRPS sheds light on their functional evolution

1 reference

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27 May 2018

Identifying bacterial genes and endosymbiont DNA with Glimmer

1 reference

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27 May 2018

Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs)

1 reference

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27 May 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

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27 May 2018

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

1 reference

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27 May 2018

Artemis: sequence visualization and annotation

1 reference

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27 May 2018

Kernel based machine learning algorithm for the efficient prediction of type III polyketide synthase family of proteins.

1 reference

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16 August 2018

CLUSEAN: a computer-based framework for the automated analysis of bacterial secondary metabolite biosynthetic gene clusters.

1 reference

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16 August 2018

Comprehensive analysis of distinctive polyketide and nonribosomal peptide structural motifs encoded in microbial genomes.

1 reference

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16 August 2018

Comparative analysis and insights into the evolution of gene clusters for glycopeptide antibiotic biosynthesis.

1 reference

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TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

1 reference

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16 August 2018

Computational approach for prediction of domain organization and substrate specificity of modular polyketide synthases

1 reference

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16 August 2018

Exploiting plug-and-play synthetic biology for drug discovery and production in microorganisms

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1 December 2018

SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules

1 reference

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11 September 2021

Identifiers

10.1093/NAR/GKR466

1 reference

Europe PubMed Central

7 November 2017

DBLP publication ID

journals/nar/MedemaBCJZFWTB11

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

Europe PubMed Central

7 November 2017

1 reference

Europe PubMed Central

7 November 2017

ResearchGate publication ID

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