(Q34436449)

2 August 2017

title

Internal duplications in α-helical membrane protein topologies are common but the nonduplicated forms are rare (English)

1 reference

2 August 2017

Erik Lindahl

3

0 references

Arne Elofsson

object named as

Arne Elofsson

series ordinal

4

0 references

author name string

Aron Hennerdal

series ordinal

1

1 reference

2 August 2017

Jenny Falk

series ordinal

2

1 reference

2 August 2017

language of work or name

1 reference

1 December 2010

1 reference

2 August 2017

1 reference

2 August 2017

volume

19

1 reference

2 August 2017

issue

12

1 reference

2 August 2017

page(s)

2305-2318

1 reference

Prediction of membrane-protein topology from first principles

2 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Evolution of antiparallel two-domain membrane proteins: tracing multiple gene duplication events in the DUF606 family

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Common occurrence of internal repeat symmetry in membrane proteins.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Structure and mechanism of ABC transporter proteins.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Membrane protein structure: prediction versus reality.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Evolution of Circular Permutations in Multidomain Proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

OPM: orientations of proteins in membranes database

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Kalign--an accurate and fast multiple sequence alignment algorithm

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Comparative analysis of amino acid distributions in integral membrane proteins from 107 genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

A study of the membrane-water interface region of membrane proteins.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Transmembrane protein domains rarely use covalent domain recombination as an evolutionary mechanism

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Improved detection of homologous membrane proteins by inclusion of information from topology predictions.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

X-ray structure of a ClC chloride channel at 3.0 A reveals the molecular basis of anion selectivity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Clustering of highly homologous sequences to reduce the size of large protein databases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Phylogenetic analysis using PHYLIP.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Divergent evolution of membrane protein topology: the Escherichia coli RnfA and RnfE homologues

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

The SWISS-PROT protein sequence data bank and its new supplement TREMBL

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Topogenic signals in integral membrane proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Remote homology detection of integral membrane proteins using conserved sequence features.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Emulating membrane protein evolution by rational design

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Structural classification and prediction of reentrant regions in alpha-helical transmembrane proteins: application to complete genomes.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Best alpha-helical transmembrane protein topology predictions are achieved using hidden Markov models and evolutionary information

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Internal gene duplication in the evolution of prokaryotic transmembrane proteins

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

SecDF of Bacillus subtilis, a molecular Siamese twin required for the efficient secretion of proteins.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Coils in the Membrane Core Are Conserved and Functionally Important

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3009398

Using iterative dynamic programming to obtain accurate pairwise and multiple alignments of protein structures

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20882639

12 December 2020

inferred from PubMed ID database lookup

Identification and evolution of dual-topology membrane proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20882639

12 December 2020

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/20882639

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1002/PRO.510

1 reference

release_lciayk2wvrby3dloq2wltapcti

2 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/lciayk2wvrby3dloq2wltapcti

24 November 2022

mapped directly with Wikidata item

PMC publication ID

3009398

1 reference

2 August 2017

1 reference