(Q34468432)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

title

Annotation of the zebrafish genome through an integrated transcriptomic and proteomic analysis (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

0 references

0 references

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Tai-Chung Huang

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Min-Sik Kim

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Sneha M Pinto

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Anil K Madugundu

18

1 reference

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10 March 2020

Nazia Syed

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

T S Keshava Prasad

28

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Vineet Bafna

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Tejaswini Subbannayya

Tejaswini Subbannayya

6

1 reference

ORCID Public Data File 2021

Renu Goel

27

Renu Goel

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1

Dhanashree S Kelkar

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

3

Raghothama Chaerkady

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Babylakshmi Muthusamy

4

Babylakshmi Muthusamy

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

5

Srikanth S Manda

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Lakshmi Dhevi N Selvan

7

Lakshmi Dhevi N Selvan

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

9

Keshava K Datta

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

12

Santosh Renuse

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

13

Derese Getnet

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

21

Jayshree Advani

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

22

Gourav Dey

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

23

Lavanya Balakrishnan

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

25

Vishalakshi Nanjappa

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

30

Ravi Sirdeshmukh

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

31

Harsha Gowda

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

33

Steven D Leach

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Yashwanth Subbannayya

26

Yashwanth Subbannayya

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

author name string

Elayne Provost

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Chieh-Huei Wang

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Sunghee Woo

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Christopher J Mitchell

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Praveen Kumar

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Jyoti Sharma

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Charles Wang

32

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

Akhilesh Pandey

34

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

publication date

24 July 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

Molecular & Cellular Proteomics

10 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

volume

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

page(s)

3184-3198

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

A draft map of the human proteome

10 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Global protein expression profiling of zebrafish organs based on in vivo incorporation of stable isotopes.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Proteogenomic database construction driven from large scale RNA-seq data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

The zebrafish reference genome sequence and its relationship to the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Transcriptomic analyses of sexual dimorphism of the zebrafish liver and the effect of sex hormones

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

De novo derivation of proteomes from transcriptomes for transcript and protein identification

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

A bioinformatics approach for integrated transcriptomic and proteomic comparative analyses of model and non-sequenced anopheline vectors of human malaria parasites.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Incorporating RNA-seq data into the zebrafish Ensembl genebuild

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Extensive alternative polyadenylation during zebrafish development

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

DAVID-WS: a stateful web service to facilitate gene/protein list analysis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

VESPA: software to facilitate genomic annotation of prokaryotic organisms through integration of proteomic and transcriptomic data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

SMART 7: recent updates to the protein domain annotation resource

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Proteogenomic analysis of Mycobacterium tuberculosis by high resolution mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Target-decoy approach and false discovery rate: when things may go wrong

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

A proteogenomic analysis of Anopheles gambiae using high-resolution Fourier transform mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Global quantification of mammalian gene expression control

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Defining the transcriptome and proteome in three functionally different human cell lines

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

TopHat: discovering splice junctions with RNA-Seq

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Strong cation exchange-based fractionation of Lys-N-generated peptides facilitates the targeted analysis of post-translational modifications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Assigning significance to peptides identified by tandem mass spectrometry using decoy databases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Stable isotope labeling with amino acids in cell culture (SILAC) for studying dynamics of protein abundance and posttranslational modifications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4223501

Proteogenomic analysis of Candida glabrata using high resolution mass spectrometry.

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FMCP.M114.038299

A proteogenomic approach to map the proteome of an unsequenced pathogen - Leishmania donovani

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FMCP.M114.038299

Addressing statistical biases in nucleotide-derived protein databases for proteogenomic search strategies

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074%2FMCP.M114.038299

A reassessment of the translation initiation codon in vertebrates

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25060758

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/MCP.M114.038299

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25060758%20AND%20SRC:MED&resulttype=core&format=json

10 March 2020

1 reference