(Q34476386)

2 August 2017

title

Regulatory impact of RNA secondary structure across the Arabidopsis transcriptome (English)

1 reference

2 August 2017

0 references

Fan Li

1

1 reference

2 August 2017

Qi Zheng

2

1 reference

2 August 2017

Lee E Vandivier

3

1 reference

2 August 2017

Matthew R Willmann

4

1 reference

2 August 2017

Ying Chen

5

1 reference

2 August 2017

Brian D Gregory

6

1 reference

2 August 2017

publication date

13 November 2012

1 reference

2 August 2017

1 reference

2 August 2017

volume

24

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2 August 2017

issue

11

1 reference

2 August 2017

page(s)

4346-4359

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Global analysis of RNA secondary structure in two metazoans.

2 August 2017

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18 November 2018

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Genome-wide double-stranded RNA sequencing reveals the functional significance of base-paired RNAs in Arabidopsis

18 November 2018

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18 November 2018

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Genome-wide measurement of RNA secondary structure in yeast

18 November 2018

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Regulation of heterochromatic DNA replication by histone H3 lysine 27 methyltransferases.

18 November 2018

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Role of RNA structure in regulating pre-mRNA splicing

18 November 2018

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Architecture and secondary structure of an entire HIV-1 RNA genome

18 November 2018

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Isolation of plant polysomal mRNA by differential centrifugation and ribosome immunopurification methods

18 November 2018

1 reference

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Modulation of alternative splicing by long-range RNA structures in Drosophila

18 November 2018

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

18 November 2018

1 reference

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18 November 2018

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Origin, biogenesis, and activity of plant microRNAs

18 November 2018

1 reference

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Origins and Mechanisms of miRNAs and siRNAs

18 November 2018

1 reference

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18 November 2018

The centrality of RNA.

1 reference

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Genome-wide association of histone H3 lysine nine methylation with CHG DNA methylation in Arabidopsis thaliana

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Riboswitches: emerging themes in RNA structure and function

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

A link between RNA metabolism and silencing affecting Arabidopsis development.

18 November 2018

1 reference

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Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome

18 November 2018

1 reference

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RNA-binding proteins and post-transcriptional gene regulation

18 November 2018

1 reference

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The role of site accessibility in microRNA target recognition

18 November 2018

1 reference

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Viral RNA pseudoknots: versatile motifs in gene expression and replication

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Potent effect of target structure on microRNA function.

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

MicroRNAS and their regulatory roles in plants

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Regulation of translation via mRNA structure in prokaryotes and eukaryotes

18 November 2018

1 reference

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RNA silencing and genome regulation.

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Perspective: machines for RNAi

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Principles of microRNA-target recognition

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

18 November 2018

RNA silencing in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Mechanisms of gene silencing by double-stranded RNA

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

MicroRNAs: genomics, biogenesis, mechanism, and function

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

RNA folding affects the recruitment of SR proteins by mouse and human polypurinic enhancer elements in the fibronectin EDA exon

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Identification and characterization of multi-species conserved sequences

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Vienna RNA secondary structure server

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Downstream elements of mammalian pre-mRNA polyadenylation signals: primary, secondary and higher-order structures.

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

A variance-stabilizing transformation for gene-expression microarray data

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Variance stabilization applied to microarray data calibration and to the quantification of differential expression

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Ribonucleoprotein infrastructure regulating the flow of genetic information between the genome and the proteome

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

Inhibition of polyadenylation by stable RNA secondary structure

18 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531838

The dynamic landscapes of RNA architecture

18 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23150631

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1105/TPC.112.104232

1 reference

2 August 2017

0 references

1 reference