(Q34491190)

2 August 2017

Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes (English)

1 reference

2 August 2017

0 references

1 reference

37

1 reference

2 August 2017

19

Michael Melkonian

1 reference

2 August 2017

18

James Leebens-Mack

0 references

Richard Bruskiewich

4

Richard Bruskiewich

1 reference

Juan Carlos Villarreal Aguilar

2 August 2017

Juan Carlos Villarreal

33

0 references

Joseph Christopher Pires

J Chris Pires

23

0 references

Ingrid Jordon-Thaden

Ingrid Jordon-Thaden

16

0 references

Xiaolei Wu

Xiaolei Wu

34

0 references

Mark W. Chase

7

Mark W Chase

1 reference

2 August 2017

27

Douglas Soltis

1 reference

2 August 2017

1

Marc T J Johnson

1 reference

2 August 2017

28

Pamela Soltis

1 reference

2 August 2017

10

Claude W Depamphilis

1 reference

2 August 2017

2

Eric J Carpenter

1 reference

2 August 2017

13

Sean Graham

1 reference

2 August 2017

Dennis William Stevenson

29

Dennis Stevenson

1 reference

2 August 2017

31

Barbara Surek

1 reference

2 August 2017

36

Michael K Deyholos

1 reference

2 August 2017

25

Megan Rolf

1 reference

2 August 2017

24

Paula Ralph

1 reference

2 August 2017

11

Patrick P Edger

1 reference

2 August 2017

30

C Neal Stewart

1 reference

2 August 2017

26

Rowan F Sage

1 reference

2 August 2017

15

Julian M Hibberd

1 reference

2 August 2017

9

Sarah Covshoff

1 reference

2 August 2017

Zhijian Tian

3

1 reference

2 August 2017

Jason N Burris

5

1 reference

2 August 2017

Charlotte T Carrigan

6

1 reference

2 August 2017

Neil D Clarke

8

1 reference

2 August 2017

Falicia Goh

12

1 reference

2 August 2017

Stephan Greiner

14

1 reference

2 August 2017

Toni M Kutchan

17

1 reference

2 August 2017

Nicholas Miles

20

1 reference

2 August 2017

Henrietta Myburg

21

1 reference

2 August 2017

Jordan Patterson

22

1 reference

2 August 2017

Christina J M Thomsen

32

1 reference

2 August 2017

Yong Zhang

35

1 reference

2 August 2017

language of work or name

English

0 references

publication date

21 November 2012

1 reference

2 August 2017

1 reference

2 August 2017

7

1 reference

2 August 2017

11

1 reference

2 August 2017

e50226

1 reference

Creative Commons Attribution 4.0 International

2 August 2017

start time

21 November 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Next-generation transcriptome assembly

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Estimating the timing of early eukaryotic diversification with multigene molecular clocks

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Identification of novel soybean microRNAs involved in abiotic and biotic stresses.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

De novo sequence assembly and characterization of the floral transcriptome in cross- and self-fertilizing plants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Sequencing breakthroughs for genomic ecology and evolutionary biology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Metabolomics: the chemistry between ecology and genetics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Next-generation sequencing of transcriptomes: a guide to RNA isolation in nonmodel animals.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Ancestral polyploidy in seed plants and angiosperms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Protocol: A simple phenol-based method for 96-well extraction of high quality RNA from Arabidopsis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Integration of deep transcriptome and proteome analyses reveals the components of alkaloid metabolism in opium poppy cell cultures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Optimization of de novo transcriptome assembly from next-generation sequencing data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Next-generation genomics: an integrative approach

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Chromatin immunoprecipitation (ChIP) of plant transcription factors followed by sequencing (ChIP-SEQ) or hybridization to whole genome arrays (ChIP-CHIP).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

De novo assembly of human genomes with massively parallel short read sequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Sequencing technologies - the next generation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

A modified protocol for RNA isolation from high polysaccharide containing Cupressus arizonica pollen. Applications for RT-PCR and phage display library construction

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

6 July 2018

Direct RNA sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Comparison of next generation sequencing technologies for transcriptome characterization

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Nine exceptional radiations plus high turnover explain species diversity in jawed vertebrates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Comparison of the transcriptomes of American chestnut (Castanea dentata) and Chinese chestnut (Castanea mollissima) in response to the chestnut blight infection

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

RNA-Seq: a revolutionary tool for transcriptomics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Facing the future of plant-insect interaction research: le retour à la "raison d'être".

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

The Chlamydomonas genome reveals the evolution of key animal and plant functions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

The RIN: an RNA integrity number for assigning integrity values to RNA measurements

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

A gene expression map of Arabidopsis thaliana development

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Inhibition and facilitation of nucleic acid amplification

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

Review of the biology of Quercetin and related bioflavonoids

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3504007

How do extreme drought and plant community composition affect host plant metabolites and herbivore performance?

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0050226

A high-resolution root spatiotemporal map reveals dominant expression patterns.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0050226

One hundred important questions facing plant science research

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0050226

Effect of pH and ionic strength on the spectrophotometric assessment of nucleic acid purity

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23185583

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A robust plant RNA isolation method suitable for Affymetrix GeneChip analysis and quantitative real-time RT-PCR

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23185583

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0050226

1 reference

2 August 2017

0 references

1 reference

2 August 2017

1 reference