(Q34505487)

2 August 2017

title

Phylogenetically driven sequencing of extremely halophilic archaea reveals strategies for static and dynamic osmo-response (English)

1 reference

2 August 2017

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9

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2 August 2017

Erin A Becker

1

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Aaron Earl Darling

object named as

Aaron E Darling

10

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author name string

Phillip M Seitzer

2

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2 August 2017

Andrew Tritt

3

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2 August 2017

David Larsen

4

1 reference

2 August 2017

Megan Krusor

5

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2 August 2017

Andrew I Yao

6

1 reference

2 August 2017

Dongying Wu

7

1 reference

2 August 2017

Dominique Madern

8

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2 August 2017

Marc T Facciotti

11

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2 August 2017

publication date

13 November 2014

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2 August 2017

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2 August 2017

volume

10

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2 August 2017

issue

11

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2 August 2017

page(s)

e1004784

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Creative Commons CC0 License

2 August 2017

copyright license

start time

13 November 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

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Functional genomic and advanced genetic studies reveal novel insights into the metabolism, regulation, and biology of Haloferax volcanii.

7 July 2018

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Genome Sequence of Halobiforma lacisalsi AJ5, an Extremely Halophilic Archaeon Which Harbors a bop Gene

7 July 2018

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7 July 2018

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Arg149 is involved in switching the low affinity, open state of the binding protein AfProX into its high affinity, closed state

7 July 2018

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Aquaporins in sperm osmoadaptation: an emerging role for volume regulation

7 July 2018

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7 July 2018

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Temperature and pH optima of extremely halophilic archaea: a mini-review.

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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The molecular basis of salt adaptation in Methanosarcina mazei Gö1.

7 July 2018

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Metabolism of halophilic archaea

7 July 2018

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7 July 2018

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7 July 2018

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Genetic and transcriptomic analysis of transcription factor genes in the model halophilic Archaeon: coordinate action of TbpD and TfbA

7 July 2018

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General transcription factor specified global gene regulation in archaea

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Horizontal gene transfer, genome innovation and evolution

7 July 2018

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7 July 2018

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Thermoprotection of Bacillus subtilis by exogenously provided glycine betaine and structurally related compatible solutes: involvement of Opu transporters

7 July 2018

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APE: Analyses of Phylogenetics and Evolution in R language

7 July 2018

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Disorders of body water homeostasis

7 July 2018

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Structures of deacylated tRNA mimics bound to the E site of the large ribosomal subunit

7 July 2018

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Taxonomic problems arising in the genera Haloterrigena and Natrinema

7 July 2018

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The source of laterally transferred genes in bacterial genomes

7 July 2018

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Metabolism of chloride in halophilic prokaryotes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

Compatible solutes of organisms that live in hot saline environments

7 July 2018

1 reference

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MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

7 July 2018

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A novel mode of sensory transduction in archaea: binding protein-mediated chemotaxis towards osmoprotectants and amino acids

7 July 2018

1 reference

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An efficient algorithm for large-scale detection of protein families

7 July 2018

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Osmosensing and osmoregulatory compatible solute accumulation by bacteria

7 July 2018

1 reference

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Influence of dehydration on glycerophosphorylcholine and choline distribution along the rat nephron

7 July 2018

1 reference

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Transfer of Natrialba asiatica B1T to Natrialba taiwanensis sp. nov. and description of Natrialba aegyptiaca sp. nov., a novel extremely halophilic, aerobic, non-pigmented member of the Archaea from Egypt that produces extracellular poly(glutamic ac

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

Inducible metabolism of phenolic acids in Pediococcus pentosaceus is encoded by an autoregulated operon which involves a new class of negative transcriptional regulator

7 July 2018

1 reference

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Genome sequence of Halobacterium species NRC-1

7 July 2018

1 reference

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Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution

7 July 2018

1 reference

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Halophilic adaptation of enzymes

7 July 2018

1 reference

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The COG database: a tool for genome-scale analysis of protein functions and evolution

7 July 2018

1 reference

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The structural basis for the oriented assembly of a TBP/TFB/promoter complex

7 July 2018

1 reference

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Bioenergetic aspects of halophilism

7 July 2018

1 reference

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Protection of Escherichia coli cells against extreme turgor by activation of MscS and MscL mechanosensitive channels: identification of genes required for MscS activity

7 July 2018

1 reference

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Transcription initiation in Archaea: facts, factors and future aspects

7 July 2018

1 reference

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Cluster analysis and display of genome-wide expression patterns

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

Uptake and synthesis of compatible solutes as microbial stress responses to high-osmolality environments

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

Synthesis of the osmoprotectant glycine betaine in Bacillus subtilis: characterization of the gbsAB genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

Primary and secondary chloride transport in Halobacterium halobium

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

The lipids of archaebacteria

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

DNA sequence and analysis of the bet genes encoding the osmoregulatory choline-glycine betaine pathway of Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

The survival of Listeria monocytogenes during long term desiccation is facilitated by sodium chloride and organic material

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

Evolution of the RNA polymerase B' subunit gene (rpoB') in Halobacteriales: a complementary molecular marker to the SSU rRNA gene.

21 January 2018

1 reference

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Archaeal phylogenomics provides evidence in support of a methanogenic origin of the Archaea and a thaumarchaeal origin for the eukaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

LadR, a new PadR-related transcriptional regulator from Listeria monocytogenes, negatively regulates the expression of the multidrug efflux pump MdrL.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

HMG-CoA reductase is regulated by salinity at the level of transcription in Haloferax volcanii.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

Secondary active transport mediated by a prokaryotic homologue of ClC Cl- channels

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

Hydration shells with a pinch of salt.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

Whole proteome pI values correlate with subcellular localizations of proteins for organisms within the three domains of life.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

Emended descriptions of genera of the family Halobacteriaceae

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

Variations in the multiple tbp genes in different Halobacterium salinarum strains and their expression during growth

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

Choosing BLAST options for better detection of orthologs as reciprocal best hits.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1004784

A biological role for prokaryotic ClC chloride channels

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4230888

Gene expression profiling in brain following acute systemic hypertonicity: novel genes possibly involved in osmoadaptation

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25393412

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Archaebacterial lipids: highly proton-impermeable membranes from 1,2-diphytanyl-sn-glycero-3-phosphocoline

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25393412

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1004784

1 reference

2 August 2017

1 reference

2 August 2017

1 reference