(Q34518186)

2 August 2017

title

Differences in enhancer activity in mouse and zebrafish reporter assays are often associated with changes in gene expression (English)

1 reference

2 August 2017

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6

1 reference

2 August 2017

José Bessa

7

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José Luis Gómez-Skarmeta

object named as

José Luis Gómez-Skarmeta

5

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Axel Visel

object named as

Axel Visel

2

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Len A. Pennacchio

object named as

Len A Pennacchio

3

1 reference

ORCID Public Data File 2021

author name string

Ana Ariza-Cosano

1

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2 August 2017

Hunter B Fraser

4

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2 August 2017

language of work or name

English

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publication date

19 December 2012

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2 August 2017

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2 August 2017

volume

13

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2 August 2017

page(s)

713

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https://scigraph.springernature.com/pub.10.1186/1471-2164-13-713

2 August 2017

exact match

0 references

cites work

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7 July 2018

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Mouse transgenesis identifies conserved functional enhancers and cis-regulatory motif in the vertebrate LIM homeobox gene Lhx2 locus

7 July 2018

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7 July 2018

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7 July 2018

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Characterization of new otic enhancers of the pou3f4 gene reveal distinct signaling pathway regulation and spatio-temporal patterns.

7 July 2018

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7 July 2018

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Cooperative action of multiple cis-acting elements is required for N-myc expression in branchial arches: specific contribution of GATA3

7 July 2018

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Multiple enhancers located in a 1-Mb region upstream of POU3F4 promote expression during inner ear development and may be required for hearing

7 July 2018

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An 8q24 gene desert variant associated with prostate cancer risk confers differential in vivo activity to a MYC enhancer

7 July 2018

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7 July 2018

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7 July 2018

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Genome-wide discovery of human heart enhancers

7 July 2018

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Regulatory divergence of the duplicated chromosomal loci sox11a/b by subpartitioning and sequence evolution of enhancers in zebrafish

7 July 2018

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7 July 2018

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7 July 2018

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Roles of trans and cis variation in yeast intraspecies evolution of gene expression

7 July 2018

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Functional autonomy of distant-acting human enhancers

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

ChIP-seq accurately predicts tissue-specific activity of enhancers

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Functional resolution of duplicated hoxb5 genes in teleosts

7 July 2018

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Species-specific transcription in mice carrying human chromosome 21

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Identification of neural crest and glial enhancers at the mouse Sox10 locus through transgenesis in zebrafish

7 July 2018

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Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

7 July 2018

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Conserved non-coding sequences and transcriptional regulation

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Subfunctionalization of duplicated zebrafish pax6 genes by cis-regulatory divergence

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Multiple conserved regulatory elements with overlapping functions determine Sox10 expression in mouse embryogenesis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

The evolution of gene expression QTL in Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Expression evolution in yeast genes of single-input modules is mainly due to changes in trans-acting factors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Ancient noncoding elements conserved in the human genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

VISTA Enhancer Browser--a database of tissue-specific human enhancers

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

In vivo enhancer analysis of human conserved non-coding sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

The Zebrafish Information Network: the zebrafish model organism database

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Human-zebrafish non-coding conserved elements act in vivo to regulate transcription

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Local regulatory variation in Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Large-scale enhancer detection in the zebrafish genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Highly conserved non-coding sequences are associated with vertebrate development

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

GenePaint.org: an atlas of gene expression patterns in the mouse embryo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Identification of a functional transposase of the Tol2 element, an Ac-like element from the Japanese medaka fish, and its transposition in the zebrafish germ lineage

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Stages of embryonic development of the zebrafish

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Antagonizing the Spemann organizer: role of the homeobox gene Xvent-1.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Induction of ectopic eyes by targeted expression of the eyeless gene in Drosophila

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Evolution at two levels in humans and chimpanzees

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

A yeast hybrid provides insight into the evolution of gene expression regulation.

7 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Evolutionary changes in cis and trans gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Regulatory changes underlying expression differences within and between Drosophila species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Cracking the genome's second code: enhancer detection by combined phylogenetic footprinting and transgenic fish and frog embryos.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Cis-regulation and chromosomal rearrangement of the fgf8 locus after the teleost/tetrapod split.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Cis-regulatory characterization of sequence conservation surrounding the Hox4 genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Megabase deletions of gene deserts result in viable mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Multiple elements regulate Mash1 expression in the developing CNS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Multiple regulatory elements with spatially and temporally distinct activities control neurogenin1 expression in primary neurons of the zebrafish embryo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Transcriptional features of genomic regulatory blocks

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Odd-skipped genes encode repressors that control kidney development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

An evolutionarily conserved three-dimensional structure in the vertebrate Irx clusters facilitates enhancer sharing and coregulation.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3541358

Zebrafish enhancer detection (ZED) vector: A new tool to facilitate transgenesis and the functional analysis ofcis-regulatory regions in zebrafish

27 October 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

Identification of evolutionarily conserved regulatory elements in the mouse Fgf8 locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-713

21 January 2018

Identifiers

DOI

10.1186/1471-2164-13-713

1 reference

Dimensions Publication ID

2 August 2017

0 references

1 reference

2 August 2017

1 reference