(Q34531280)

2 August 2017

title

DNA Topoisomerases maintain promoters in a state competent for transcriptional activation in Saccharomyces cerevisiae (English)

1 reference

2 August 2017

main subject

Saccharomyces cerevisiae

1 reference

inferred from title

author

Mikkel Heide Schierup

8

1 reference

2 August 2017

author name string

Jakob Madsen Pedersen

1

1 reference

2 August 2017

Jacob Fredsoe

2

1 reference

2 August 2017

Morten Roedgaard

3

1 reference

2 August 2017

Lotte Andreasen

4

1 reference

2 August 2017

Kamilla Mundbjerg

5

1 reference

2 August 2017

Mogens Kruhøffer

6

1 reference

2 August 2017

Marie Brinch

7

1 reference

2 August 2017

Lotte Bjergbaek

9

1 reference

2 August 2017

Anni Hangaard Andersen

10

1 reference

2 August 2017

publication date

20 December 2012

1 reference

2 August 2017

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2 August 2017

volume

8

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2 August 2017

issue

12

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2 August 2017

page(s)

e1003128

1 reference

Creative Commons Attribution 4.0 International

2 August 2017

copyright license

start time

20 December 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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7 July 2018

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7 July 2018

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Top1- and Top2-mediated topological transitions at replication forks ensure fork progression and stability and prevent DNA damage checkpoint activation

7 July 2018

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7 July 2018

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7 July 2018

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Topoisomerase II, not topoisomerase I, is the proficient relaxase of nucleosomal DNA.

7 July 2018

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7 July 2018

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Evidence for histone eviction in trans upon induction of the yeast PHO5 promoter

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Cellular roles of dna topoisomerases: a molecular perspective

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

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7 July 2018

1 reference

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7 July 2018

1 reference

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7 July 2018

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7 July 2018

1 reference

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7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

Absence of Gcn5 HAT activity defines a novel state in the opening of chromatin at the PHO5 promoter in yeast

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

Topoisomerase function during replication-independent chromatin assembly in yeast

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

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7 July 2018

1 reference

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DNA topology and a minimal set of basal factors for transcription by RNA polymerase II

7 July 2018

1 reference

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DNA topoisomerase I controls the kinetics of promoter activation and DNA topology in Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

DNA topoisomerase I is involved in both repression and activation of transcription

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

The transactivation domain of Pho4 is required for nucleosome disruption at the PHO5 promoter.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

The DNA binding, cleavage, and religation reactions of eukaryotic topoisomerases I and II.

7 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

7 July 2018

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Depletion of histone H4 and nucleosomes activates the PHO5 gene in Saccharomyces cerevisiae.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

Assembly of spaced chromatin involvement of ATP and DNA topoisomerase activity

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

Supercoiling of the DNA template during transcription

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

Formation of nucleosomes on positively supercoiled DNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

Positive supercoiling of DNA greatly diminishes mRNA synthesis in yeast

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3527272

The functional response of upstream DNA to dynamic supercoiling in vivo

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Local domains of supercoiling activate a eukaryotic promoter in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Global transcription regulation by DNA topoisomerase I in exponentially growing Saccharomyces cerevisiae cells: activation of telomere-proximal genes by TOP1 deletion

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Genome-organizing factors Top2 and Hmo1 prevent chromosome fragility at sites of S phase transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Identification and distinct regulation of yeast TATA box-containing genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Histones are first hyperacetylated and then lose contact with the activated PHO5 promoter.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Nucleosome transactions on the promoters of the yeast GAL and PHO genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

A Flp-nick system to study repair of a single protein-bound nick in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Exploring functional relationships between components of the gene expression machinery.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Need for DNA topoisomerase activity as a swivel for DNA replication for transcription of ribosomal RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003128

Topoisomerases and yeast rRNA transcription: negative supercoiling stimulates initiation and topoisomerase activity is required for elongation

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23284296

12 December 2020

inferred from PubMed ID database lookup

Redundancy of chromatin remodeling pathways for the induction of the yeast PHO5 promoter in vivo

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23284296

12 December 2020

inferred from PubMed ID database lookup

SWI/SNF chromatin remodeling requires changes in DNA topology

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23284296

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1371/JOURNAL.PGEN.1003128

1 reference

2 August 2017

1 reference

2 August 2017

1 reference