(Q34552487)

3 August 2017

BBCA: Improving the scalability of *BEAST using random binning (English)

1 reference

3 August 2017

2

1 reference

3 August 2017

3

Tandy Warnow

1 reference

3 August 2017

Théo Zimmermann

1

1 reference

PubMed ID

25572469

3 August 2017

language of work or name

English

0 references

publication date

17 October 2014

1 reference

3 August 2017

1 reference

3 August 2017

15 Suppl 6

1 reference

3 August 2017

S11

1 reference

Disk covering methods improve phylogenomic analyses

3 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

ASTRAL: genome-scale coalescent-based species tree estimation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Origin of land plants using the multispecies coalescent model

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Full modeling versus summarizing gene-tree uncertainty: method choice and species-tree accuracy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Fast and accurate methods for phylogenomic analyses

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

A maximum pseudo-likelihood approach for estimating species trees under the coalescent model

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

DendroPy: a Python library for phylogenetic computing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

FastTree 2--approximately maximum-likelihood trees for large alignments

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Bayesian inference of species trees from multilocus data

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Gene tree discordance, phylogenetic inference and the multispecies coalescent

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Is a new and general theory of molecular systematics emerging?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Non-homogeneous models of sequence evolution in the Bio++ suite of libraries and programs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Inconsistency of phylogenetic estimates from concatenated data under coalescence

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4239591

Anomalous unrooted gene trees.

7 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-S6-S11

The accuracy of species tree estimation under simulation: a comparison of methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-S6-S11

Estimating species phylogenies using coalescence times among sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-S6-S11

STEM: species tree estimation using maximum likelihood for gene trees under coalescence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-S6-S11

BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-S6-S11

Land plant origins and coalescence confusion

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-S6-S11

BEST: Bayesian estimation of species trees under the coalescent model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-S6-S11

Comparing two Bayesian methods for gene tree/species tree reconstruction: simulations with incomplete lineage sorting and horizontal gene transfer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-15-S6-S11

Naive binning improves phylogenomic analyses

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25572469

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-15-S6-S11

1 reference

3 August 2017

1 reference

3 August 2017

1 reference

PubMed ID

25572469