(Q34352936)

1 August 2017

Full modeling versus summarizing gene-tree uncertainty: method choice and species-tree accuracy (English)

1 reference

1 August 2017

1

L Lacey Knowles

1 reference

1 August 2017

Hayley C Lanier

2

1 reference

PubMed ID

22835380

1 August 2017

Pavel B Klimov

series ordinal

3

1 reference

PubMed ID

22835380

1 August 2017

Qixin He

series ordinal

4

1 reference

1 August 2017

23 July 2012

1 reference

Molecular Phylogenetics and Evolution

1 August 2017

9

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

1 August 2017

65

1 reference

1 August 2017

2

1 reference

1 August 2017

501-509

1 reference

When trees grow too long: investigating the causes of highly inaccurate bayesian branch-length estimates.

1 August 2017

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Estimating species phylogeny from gene-tree probabilities despite incomplete lineage sorting: an example from Melanoplus grasshoppers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Comparing two Bayesian methods for gene tree/species tree reconstruction: simulations with incomplete lineage sorting and horizontal gene transfer.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Species trees from highly incongruent gene trees in rice.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Phylogenomics and the reconstruction of the tree of life

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Does gene flow destroy phylogenetic signal? The performance of three methods for estimating species phylogenies in the presence of gene flow

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

High-resolution species trees without concatenation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Reconstructing the phylogeny of "Buarremon" brush-finches and near relatives (Aves, Emberizidae) from individual gene trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

GEIGER: investigating evolutionary radiations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Bayesian inference of species trees from multilocus data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

A justification for reporting the majority-rule consensus tree in Bayesian phylogenetics.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Sources of error inherent in species-tree estimation: impact of mutational and coalescent effects on accuracy and implications for choosing among different methods

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

What is the danger of the anomaly zone for empirical phylogenetics?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Generating samples under a Wright-Fisher neutral model of genetic variation

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

MRBAYES: Bayesian inference of phylogenetic trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Estimating species trees: methods of phylogenetic analysis when there is incongruence across genes.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

STEM: species tree estimation using maximum likelihood for gene trees under coalescence.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Is recombination a problem for species-tree analyses?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

The accuracy of species tree estimation under simulation: a comparison of methods

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

BEST: Bayesian estimation of species trees under the coalescent model.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

A maximum pseudo-likelihood approach for estimating species trees under the coalescent model

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Coalescent methods for estimating phylogenetic trees

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Inferring phylogeny despite incomplete lineage sorting

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Maximum likelihood estimates of species trees: how accuracy of phylogenetic inference depends upon the divergence history and sampling design

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Resolving difficult phylogenetic questions: why more sequences are not enough

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Phylogenetic representativeness: a new method for evaluating taxon sampling in evolutionary studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

The deepest divergences in land plants inferred from phylogenomic evidence

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Branch length estimation and divergence dating: estimates of error in Bayesian and maximum likelihood frameworks

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Species tree inference by minimizing deep coalescences

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Profiling phylogenetic informativeness

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

Taxon sampling and the optimal rates of evolution for phylogenetic inference.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2012.07.004

10.1016/J.YMPEV.2012.07.004

7 January 2021

Identifiers

DOI

1 reference

1 August 2017

1 reference

PubMed ID

22835380