(Q34655469)

3 August 2017

title

High-throughput genome sequencing of lichenizing fungi to assess gene loss in the ammonium transporter/ammonia permease gene family (English)

1 reference

3 August 2017

0 references

1 reference

4

François Lutzoni

1 reference

3 August 2017

Tami R McDonald

1

1 reference

3 August 2017

Olaf Mueller

series ordinal

2

1 reference

3 August 2017

Fred S Dietrich

series ordinal

3

1 reference

3 August 2017

language of work or name

English

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publication date

4 April 2013

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3 August 2017

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3 August 2017

volume

14

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3 August 2017

page(s)

225

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Ascospore discharge, germination and culture of fungal partners of tropical lichens, including the use of a novel culture technique

3 August 2017

cites work

1 reference

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Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota).

7 July 2018

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Draft genome sequence of the extremely acidophilic biomining bacterium Acidithiobacillus thiooxidans ATCC 19377 provides insights into the evolution of the Acidithiobacillus genus

7 July 2018

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Photoautotrophic symbiont and geography are major factors affecting highly structured and diverse bacterial communities in the lichen microbiome

7 July 2018

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Multiple horizontal gene transfers of ammonium transporters/ammonia permeases from prokaryotes to eukaryotes: toward a new functional and evolutionary classification

7 July 2018

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Phylogenetic classification of peltigeralean fungi (Peltigerales, Ascomycota) based on ribosomal RNA small and large subunits

7 July 2018

1 reference

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Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits

7 July 2018

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Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP).

7 July 2018

1 reference

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Transport mechanisms in the ammonium transporter family.

7 July 2018

1 reference

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A phylogenetic estimation of trophic transition networks for ascomycetous fungi: are lichens cradles of symbiotrophic fungal diversification?

7 July 2018

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The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits

7 July 2018

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Function of human Rh based on structure of RhCG at 2.1 A

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Draft genome sequence of the extremely acidophilic bacterium Acidithiobacillus caldus ATCC 51756 reveals metabolic versatility in the genus Acidithiobacillus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing "Leptospirillum rubarum" (Group II) and "Leptospirillum ferrodiazotrophum" (Group III) bacteria in acid mine drainage biofilms

7 July 2018

1 reference

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Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Assessing the gene space in draft genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

jModelTest: phylogenetic model averaging

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Amt2 permease is required to induce ammonium-responsive invasive growth and mating in Cryptococcus neoformans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Structure of the Nitrosomonas europaea Rh protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

A higher-level phylogenetic classification of the Fungi

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

A five-gene phylogeny of Pezizomycotina

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

A stable water chain in the hydrophobic pore of the AmtB ammonium transporter

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Reconstructing the early evolution of Fungi using a six-gene phylogeny

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

An unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Biological gas channels for NH3 and CO2: evidence that Rh (Rhesus) proteins are CO2 channels

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Ammonium ion transport by the AMT/Rh homologue LeAMT1;1

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Differential expression of Aspergillus nidulans ammonium permease genes is regulated by GATA transcription factor AreA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

GintAMT1 encodes a functional high-affinity ammonium transporter that is expressed in the extraradical mycelium of Glomus intraradices

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Amt/MEP/Rh proteins conduct ammonia

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Crystal structure of the archaeal ammonium transporter Amt-1 from Archaeoglobus fulgidus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

RAxML-III: a fast program for maximum likelihood-based inference of large phylogenetic trees

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

The mechanism of ammonia transport based on the crystal structure of AmtB of Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Mechanism of ammonia transport by Amt/MEP/Rh: structure of AmtB at 1.35 A.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Genome sequence of Picrophilus torridus and its implications for life around pH 0

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Characterization of Ferroplasma isolates and Ferroplasma acidarmanus sp. nov., extreme acidophiles from acid mine drainage and industrial bioleaching environments

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Molecular and cellular characterisation of LjAMT2;1, an ammonium transporter from the model legume Lotus japonicus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Isolation and characterization of two ammonium permease genes, meaA and mepA, from Aspergillus nidulans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Prokaryotic evolution in light of gene transfer

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Sulfolobus tokodaii sp. nov. (f. Sulfolobus sp. strain 7), a new member of the genus Sulfolobus isolated from Beppu Hot Springs, Japan

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

The complete genome of the crenarchaeon Sulfolobus solfataricus P2

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

In vivo N-glycosylation of the mep2 high-affinity ammonium transporter of Saccharomyces cerevisiae reveals an extracytosolic N-terminus.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Reclassification of some species of Thiobacillus to the newly designated genera Acidithiobacillus gen. nov., Halothiobacillus gen. nov. and Thermithiobacillus gen. nov.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Caldivirga maquilingensis gen. nov., sp. nov., a new genus of rod-shaped crenarchaeote isolated from a hot spring in the Philippines

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

The MEP2 ammonium permease regulates pseudohyphal differentiation in Saccharomyces cerevisiae.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

A family of ammonium transporters in Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Picrophilus gen. nov., fam. nov.: a novel aerobic, heterotrophic, thermoacidophilic genus and family comprising archaea capable of growth around pH 0

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Identification of a high affinity NH4+ transporter from plants

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Cloning and expression of the MEP1 gene encoding an ammonium transporter in Saccharomyces cerevisiae

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Yeast vectors for the controlled expression of heterologous proteins in different genetic backgrounds

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Sulfolobus: A new genus of sulfur-oxidizing bacteria living at low pH and high temperature

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Unipolar cell divisions in the yeast S. cerevisiae lead to filamentous growth: regulation by starvation and RAS

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Detailed mechanism for AmtB conducting NH4+/NH3: molecular dynamics simulations.

7 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-225

A high-affinity ammonium transporter from the mycorrhizal ascomycete Tuber borchii.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-225

The expanded family of ammonium transporters in the perennial poplar plant.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-225

Uniport of NH4+ by the root hair plasma membrane ammonium transporter LeAMT1;1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-225

Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-225

Isolation and characterization from pathogenic fungi of genes encoding ammonium permeases and their roles in dimorphism.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-225

Role of AMT1;1 in NH4+ acquisition in Arabidopsis thaliana.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Purification of the Escherichia coli ammonium transporter AmtB reveals a trimeric stoichiometry

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Characterization of Arabidopsis AtAMT2, a novel ammonium transporter in plants.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3663718

Acquisition of prokaryotic genes by fungal genomes

26 October 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-225

The Rh (rhesus) blood group polypeptides are related to NH4+ transporters

21 January 2018

1 reference

12 December 2020

Mutation and functional analysis of the Aspergillus nidulans ammonium permease MeaA and evidence for interaction with itself and MepA

1 reference

12 December 2020

Artificial Reestablishment of the Lichen Cladonia cristatella

1 reference

12 December 2020

General method for plasmid construction using homologous recombination

1 reference

12 December 2020

Characterization of Arabidopsis AtAMT2, a high-affinity ammonium transporter of the plasma membrane

1 reference

12 December 2020

Multiplicity of the amino acid permeases in Saccharomyces cerevisiae. I. Evidence for a specific arginine-transporting system

1 reference

12 December 2020

High-affinity ammonium transporters and nitrogen sensing in mycorrhizas

1 reference

12 December 2020

Quick and easy yeast transformation using the LiAc/SS carrier DNA/PEG method

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-14-225

1 reference

3 August 2017

1 reference

3 August 2017

1 reference