(Q34769240)

4 August 2017

title

E. coli DNA associated with isolated Hfq interacts with Hfq's distal surface and C-terminal domain (English)

1 reference

4 August 2017

0 references

1

Taylor B Updegrove

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4 August 2017

5

Roger M Wartell

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4 August 2017

John J Correia

2

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4 August 2017

Roberto Galletto

series ordinal

3

1 reference

4 August 2017

Wlodzimierz Bujalowski

series ordinal

4

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4 August 2017

language of work or name

English

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publication date

7 July 2010

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4 August 2017

number of pages

9

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Biochimica et Biophysica Acta

inferred from page(s)

published in

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4 August 2017

volume

1799

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4 August 2017

issue

8

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4 August 2017

page(s)

588-596

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Hfq affects mRNA levels independently of degradation

4 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Cellular electron microscopy imaging reveals the localization of the Hfq protein close to the bacterial membrane

7 July 2018

1 reference

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Involvement of the post-transcriptional regulator Hfq in Yersinia pestis virulence

7 July 2018

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Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level

7 July 2018

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Regulatory RNAs in bacteria

7 July 2018

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Hfq, a novel pleiotropic regulator of virulence-associated genes in Francisella tularensis

7 July 2018

1 reference

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Effect of Hfq on RprA-rpoS mRNA pairing: Hfq-RNA binding and the influence of the 5' rpoS mRNA leader region

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse

7 July 2018

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The C-terminal domain of Escherichia coli Hfq is required for regulation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Sm-like protein Hfq: location of the ATP-binding site and the effect of ATP on Hfq-- RNA complexes.

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

The Gibbs Centroid Sampler

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Hfq structure, function and ligand binding

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Escherichia coli Hfq binds A18 and DsrA domain II with similar 2:1 Hfq6/RNA stoichiometry using different surface sites

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Bacterial small RNA regulators

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Escherichia coli Hfq has distinct interaction surfaces for DsrA, rpoS and poly(A) RNAs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Analysis of heterologous interacting systems by sedimentation velocity: curve fitting algorithms for estimation of sedimentation coefficients, equilibrium and kinetic constants

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

The C-terminal domain of Escherichia coli Hfq increases the stability of the hexamer.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

The bacterial Sm-like protein Hfq: a key player in RNA transactions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Reduced virulence of a hfq mutant of Pseudomonas aeruginosa O1

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

DNA analysis servers: plot.it, bend.it, model.it and IS.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs)

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Identification of the Hfq-binding site on DsrA RNA: Hfq binds without altering DsrA secondary structure

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Size-distribution analysis of proteins by analytical ultracentrifugation: strategies and application to model systems

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Ecologic genomics of DNA: upstream bending in prokaryotic promoters

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

DNA binding properties of the hfq gene product of Escherichia coli.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

PCR amplification of megabase DNA with tagged random primers (T-PCR).

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Regulation of the Escherichia coli hfq gene encoding the host factor for phage Q beta

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Sequence-dependent bending propensity of DNA as revealed by DNase I: parameters for trinucleotides

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

A simple method for site-directed mutagenesis using the polymerase chain reaction

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Analyzing DNA curvature in polyacrylamide gels

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

On the facultative requirement of the bacterial RNA chaperone, Hfq.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Improved methods for fitting sedimentation coefficient distributions derived by time-derivative techniques.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Hfq is essential for Vibrio cholerae virulence and downregulates sigma expression

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

The Brucella abortus host factor I (HF-I) protein contributes to stress resistance during stationary phase and is a major determinant of virulence in mice

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Distribution of sequence-dependent curvature in genomic DNA sequences.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3072145

Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity

26 October 2018

1 reference

12 December 2020

Two types of localization of the DNA-binding proteins within the Escherichia coli nucleoid

1 reference

12 December 2020

Structural Modelling of the Sm-like Protein Hfq from Escherichia coli

1 reference

12 December 2020

The host factor required for RNA phage Qbeta RNA replication in vitro. Intracellular location, quantitation, and purification by polyadenylate-cellulose chromatography

1 reference

12 December 2020

An optical thermometer for direct measurement of cell temperature in the Beckman instruments XL-A analytical ultracentrifuge

1 reference

12 December 2020

Rod models of DNA: sequence-dependent anisotropic elastic modelling of local bending phenomena

1 reference

12 December 2020

Correlation of intrinsic DNA curvature with DNA property periodicity

1 reference

12 December 2020

10.1016/J.BBAGRM.2010.06.007

Identifiers

DOI

1 reference

4 August 2017

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4 August 2017

1 reference