(Q34778914)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

title

Validation of reference genes for expression studies during craniofacial development in arctic charr (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

author

Jóhannes Guðbrandsson

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Sigrídur R Franzdóttir

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Valerie H Maier

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

Sigurður Sveinn Snorrason

3 March 2020

5

object named as

Sigurður S Snorrason

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

7

Zophonías O Jónsson

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

author name string

Ehsan Pashay Ahi

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

Kalina H Kapralova

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

language of work or name

English

0 references

publication date

13 June 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

volume

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

page(s)

e66389

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

3 March 2020

copyright license

start time

13 June 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Evolution of adaptive diversity and genetic connectivity in Arctic charr (Salvelinus alpinus) in Iceland.

7 July 2018

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7 July 2018

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Orthology confers intron position conservation

7 July 2018

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Evaluation of potential reference genes for real time RT-PCR studies in Atlantic halibut (Hippoglossus Hippoglossus L.); during development, in tissues of healthy and NNV-injected fish, and in anterior kidney leucocytes

7 July 2018

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Salmonid genomes have a remarkably expanded akirin family, coexpressed with genes from conserved pathways governing skeletal muscle growth and catabolism

7 July 2018

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Validation of reference genes of grass carp Ctenopharyngodon idellus for the normalization of quantitative real-time PCR.

7 July 2018

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How to do successful gene expression analysis using real-time PCR.

7 July 2018

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Modulation of matrix remodeling by SPARC in neoplastic progression

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

New directions in craniofacial morphogenesis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

7 July 2018

1 reference

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Characterization of full-length sequenced cDNA inserts (FLIcs) from Atlantic salmon (Salmo salar)

7 July 2018

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

7 July 2018

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The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments

7 July 2018

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RNA-Seq: a revolutionary tool for transcriptomics

7 July 2018

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A salmonid EST genomic study: genes, duplications, phylogeny and microarrays

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Evaluation of candidate reference genes in Q-PCR studies of Atlantic cod (Gadus morhua) ontogeny, with emphasis on the gastrointestinal tract.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

7 July 2018

1 reference

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Sparc (Osteonectin) functions in morphogenesis of the pharyngeal skeleton and inner ear.

7 July 2018

1 reference

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Velvet: algorithms for de novo short read assembly using de Bruijn graphs

7 July 2018

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Evolution and development of complex biomechanical systems: 300 million years of fish jaws

7 July 2018

1 reference

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Secreted protein acidic and rich in cysteine deficiency ameliorates renal inflammation and fibrosis in angiotensin hypertension

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

SPARC upregulates MT1-MMP expression, MMP-2 activation, and the secretion and cleavage of galectin-3 in U87MG glioma cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data

7 July 2018

1 reference

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Genetic and developmental basis of cichlid trophic diversity.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Validation of reference genes for real-time polymerase chain reaction studies in Atlantic salmon

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets

7 July 2018

1 reference

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Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper – Excel-based tool using pair-wise correlations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Origin and diversity of the SOX transcription factor gene family: genome-wide analysis in Fugu rubripes

7 July 2018

1 reference

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Sequence analysis of a rainbow trout cDNA library and creation of a gene index

7 July 2018

1 reference

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Guideline to reference gene selection for quantitative real-time PCR

7 July 2018

1 reference

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Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data

7 July 2018

1 reference

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A zebrafish sox9 gene required for cartilage morphogenesis.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

A new mathematical model for relative quantification in real-time RT-PCR

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Sox9 is required for cartilage formation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

SOX9 directly regulates the type-II collagen gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

The biology of SPARC, a protein that modulates cell-matrix interactions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

The ecology of individuals: incidence and implications of individual specialization

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Morphological variation over ontogeny and environments in resource polymorphic arctic charr (Salvelinus alpinus).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Characterisation and expression of the paired box protein 7 (Pax7) gene in polymorphic Arctic charr (Salvelinus alpinus).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Validation of zebrafish (Danio rerio) reference genes for quantitative real-time RT-PCR normalization.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Expression profiling and validation of potential reference genes during Paralichthys olivaceus embryogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Evaluation of housekeeping genes as references for quantitative real time RT-PCR analysis of gene expression in Japanese flounder (Paralichthys olivaceus).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Glucocorticoids alter craniofacial development and increase expression and activity of matrix metalloproteinases in developing zebrafish (Danio rerio).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Two sox9 genes on duplicated zebrafish chromosomes: expression of similar transcription activators in distinct sites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

The parallel evolution of dwarfism in Arctic charr is accompanied by adaptive divergence in mTOR-pathway gene expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Positioning the expanded akirin gene family of Atlantic salmon within the transcriptional networks of myogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Parallel expression of Sox9 and Col2a1 in cells undergoing chondrogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Divergent expression patterns of Sox9 duplicates in teleosts indicate a lineage specific subfunctionalization

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Rainbow trout SOX9: cDNA cloning, gene structure and expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Dynamic expression of sparc precedes formation of skeletal elements in the Medaka (Oryzias latipes).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

Loss of MMP-2 disrupts skeletal and craniofacial development and results in decreased bone mineralization, joint erosion and defects in osteoblast and osteoclast growth

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

SPARC stimulates the synthesis of OPG/OCIF, MMP-2 and DNA in human periodontal ligament cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066389

A novel salmonid myoD gene is distinctly regulated during development and probably arose by duplication after the genome tetraploidization

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Development of cartilage and bone.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Analysis of the gene expression of SPARC and its prognostic value for bladder cancer

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Regulation and role of Sox9 in cartilage formation.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681766

Resource polymorphisms in vertebrates

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23785496

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

SPARC/osteonectin induces matrix metalloproteinase 2 activation in human breast cancer cell lines

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23785496

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0066389

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json

3 March 2020

PubMed publication ID

23785496

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23785496%20AND%20SRC:MED&resulttype=core&format=json