(Q34966567)

5 August 2017

title

Heading down the wrong pathway: on the influence of correlation within gene sets (English)

1 reference

5 August 2017

1

Daniel M Gatti

1 reference

5 August 2017

4

Ivan Rusyn

1 reference

5 August 2017

William T Barry

2

1 reference

5 August 2017

Andrew B Nobel

series ordinal

3

1 reference

5 August 2017

Fred A Wright

series ordinal

5

1 reference

5 August 2017

language of work or name

English

0 references

publication date

18 October 2010

1 reference

5 August 2017

1 reference

5 August 2017

volume

11

1 reference

5 August 2017

page(s)

574

1 reference

describes a project that uses

5 August 2017

GEOquery

object named as

GEOquery

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Gene set internal coherence in the context of functional profiling

8 July 2018

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A biological evaluation of six gene set analysis methods for identification of differentially expressed pathways in microarray data

8 July 2018

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8 July 2018

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Microarray-based gene set analysis: a comparison of current methods

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Activation of inflammation/NF-kappaB signaling in infants born to arsenic-exposed mothers

8 July 2018

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Capturing heterogeneity in gene expression studies by surrogate variable analysis

8 July 2018

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8 July 2018

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Re-sampling strategy to improve the estimation of number of null hypotheses in FDR control under strong correlation structures

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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A new type of stochastic dependence revealed in gene expression data

8 July 2018

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Microarray data analysis: from disarray to consolidation and consensus

8 July 2018

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8 July 2018

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Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

8 July 2018

1 reference

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Discovering statistically significant pathways in expression profiling studies

8 July 2018

1 reference

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8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091509

Significance analysis of functional categories in gene expression studies: a structured permutation approach

8 July 2018

1 reference

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Comparing functional annotation analyses with Catmap

8 July 2018

1 reference

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Bioconductor: open software development for computational biology and bioinformatics

8 July 2018

1 reference

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A global test for groups of genes: testing association with a clinical outcome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091509

PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes

8 July 2018

1 reference

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GoMiner: a resource for biological interpretation of genomic and proteomic data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091509

Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091509

Gene ontology: tool for the unification of biology

8 July 2018

1 reference

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8 July 2018

1 reference

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Cluster analysis and display of genome-wide expression patterns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091509

GlobalANCOVA: exploration and assessment of gene group effects.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091509

Future of toxicogenomics and safety signatures: balancing public access to data with proprietary drug discovery

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091509

Correlation between gene expression levels and limitations of the empirical bayes methodology for finding differentially expressed genes

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20955544

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Expression profiling reveals fundamental biological differences in acute myeloid leukemia with isolated trisomy 8 and normal cytogenetics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20955544

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-11-574

1 reference

5 August 2017

1 reference

5 August 2017

1 reference