(Q34989589)

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Comparative sequence and structure analysis reveals the conservation and diversity of nucleotide positions and their associated tertiary interactions in the riboswitches

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scholarly article

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Europe PubMed Central

PubMed publication ID

5 August 2017

Comparative sequence and structure analysis reveals the conservation and diversity of nucleotide positions and their associated tertiary interactions in the riboswitches (English)

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Europe PubMed Central

PubMed publication ID

5 August 2017

Sri D. Appasamy

object named as

Sri D Appasamy

1

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Effirul Ikhwan Ramlan

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Effirul Ikhwan Ramlan

2

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Mohd Firdaus Raih

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Mohd Firdaus-Raih

3

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language of work or name

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publication date

5 September 2013

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Europe PubMed Central

PubMed publication ID

5 August 2017

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

8

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Europe PubMed Central

PubMed publication ID

5 August 2017

9

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

e73984

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Europe PubMed Central

PubMed publication ID

5 August 2017

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Creative Commons Attribution 4.0 International

5 September 2013

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April 2022 Public Data File from Crossref

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NASSAM: a server to search for and annotate tertiary interactions and motifs in three-dimensional structures of complex RNA molecules

1 reference

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8 July 2018

Novel base triples in RNA structures revealed by graph theoretical searching methods

1 reference

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8 July 2018

Comprehensive survey and geometric classification of base triples in RNA structures

1 reference

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1 reference

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8 July 2018

Folding of the lysine riboswitch: importance of peripheral elements for transcriptional regulation

1 reference

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8 July 2018

Structural and Biochemical Determinants of Ligand Binding by the c-di-GMP Riboswitch,

1 reference

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8 July 2018

A switch in time: detailing the life of a riboswitch

1 reference

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8 July 2018

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1 reference

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8 July 2018

The long and the short of riboswitches.

1 reference

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8 July 2018

The Structural Basis for Recognition of the PreQ0 Metabolite by an Unusually Small Riboswitch Aptamer Domain

1 reference

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8 July 2018

Cocrystal structure of a class I preQ1 riboswitch reveals a pseudoknot recognizing an essential hypermodified nucleobase

1 reference

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Coenzyme recognition and gene regulation by a flavin mononucleotide riboswitch

1 reference

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1 reference

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8 July 2018

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1 reference

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8 July 2018

Annotation of tertiary interactions in RNA structures reveals variations and correlations

1 reference

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8 July 2018

Rfam: updates to the RNA families database

1 reference

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8 July 2018

Crystal structures of the SAM-III/S(MK) riboswitch reveal the SAM-dependent translation inhibition mechanism

1 reference

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8 July 2018

Structural insights into amino acid binding and gene control by a lysine riboswitch

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764141

8 July 2018

Riboswitches that sense S-adenosylmethionine and S-adenosylhomocysteine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764141

8 July 2018

Structure of the SAM-II riboswitch bound to S-adenosylmethionine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764141

8 July 2018

Comprehensive features of natural and in vitro selected GNRA tetraloop-binding receptors

1 reference

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8 July 2018

Chemical basis of glycine riboswitch cooperativity

1 reference

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8 July 2018

The distributions, mechanisms, and structures of metabolite-binding riboswitches

1 reference

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8 July 2018

Riboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAs

1 reference

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8 July 2018

Mutational Analysis of the Purine Riboswitch Aptamer Domain †

1 reference

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8 July 2018

Structure and mechanism of a metal-sensing regulatory RNA

1 reference

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8 July 2018

Structural features of metabolite-sensing riboswitches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764141

8 July 2018

Ligand recognition determinants of guanine riboswitches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764141

8 July 2018

A loop loop interaction and a K-turn motif located in the lysine aptamer domain are important for the riboswitch gene regulation control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764141

8 July 2018

A riboswitch selective for the queuosine precursor preQ1 contains an unusually small aptamer domain

1 reference

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8 July 2018

The THI-box riboswitch, or how RNA binds thiamin pyrophosphate

1 reference

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8 July 2018

Riboswitches: fold and function.

1 reference

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8 July 2018

Structure of the S-adenosylmethionine riboswitch regulatory mRNA element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764141

8 July 2018

Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch

1 reference

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8 July 2018

Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand

1 reference

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8 July 2018

Regulation of bacterial gene expression by riboswitches

1 reference

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8 July 2018

Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria

1 reference

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Pseudoknots: RNA structures with diverse functions

1 reference

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8 July 2018

Riboswitches as versatile gene control elements

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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A glycine-dependent riboswitch that uses cooperative binding to control gene expression

1 reference

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1 reference

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Gene regulation by riboswitches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3764141

8 July 2018

Structures of two RNA octamers containing tandem G.A base pairs

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

https://pubmed.ncbi.nlm.nih.gov/24040136

12 December 2020

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Identifiers

10.1371/JOURNAL.PONE.0073984

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

2013PLoSO...873984A

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

ResearchGate publication ID

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