(Q34998707)

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De novo assembly of the sea cucumber Apostichopus japonicus hemocytes transcriptome to identify miRNA targets associated with skin ulceration syndrome

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scholarly article

1 reference

Europe PubMed Central

5 August 2017

De novo assembly of the sea cucumber Apostichopus japonicus hemocytes transcriptome to identify miRNA targets associated with skin ulceration syndrome (English)

1 reference

Europe PubMed Central

5 August 2017

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Apostichopus japonicus

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based on heuristic

inferred from title

object named as

Chenghua Li

2

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author name string

Pengjuan Zhang

1

1 reference

Europe PubMed Central

5 August 2017

Lin Zhu

3

1 reference

Europe PubMed Central

5 August 2017

Xiurong Su

4

1 reference

Europe PubMed Central

5 August 2017

Ye Li

5

1 reference

Europe PubMed Central

5 August 2017

Chunhua Jin

6

1 reference

Europe PubMed Central

5 August 2017

Taiwu Li

7

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Europe PubMed Central

5 August 2017

language of work or name

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publication date

12 September 2013

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Europe PubMed Central

5 August 2017

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Europe PubMed Central

5 August 2017

8

1 reference

Europe PubMed Central

5 August 2017

9

1 reference

Europe PubMed Central

5 August 2017

e73506

1 reference

Europe PubMed Central

5 August 2017

copyright license

Creative Commons Attribution 4.0 International

12 September 2013

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April 2022 Public Data File from Crossref

copyright status

0 references

Integrated analysis of microRNA and mRNA expression: adding biological significance to microRNA target predictions

1 reference

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Genetic variations creating microRNA target sites in the FXN 3'-UTR affect frataxin expression in Friedreich ataxia

1 reference

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8 July 2018

Interplay of microRNAs, transcription factors and target genes: linking dynamic expression changes to function

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Joint analysis of miRNA and mRNA expression data

1 reference

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8 July 2018

Characterization of skin ulceration syndrome associated microRNAs in sea cucumber Apostichopus japonicus by deep sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3772007

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Transcriptome sequencing and characterization for the sea cucumber Apostichopus japonicus (Selenka, 1867)

1 reference

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Molecular cloning, characterization and expression analysis of a C-type lectin (AJCTL) from the sea cucumber Apostichopus japonicus

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Large scale gene expression profiling during intestine and body wall regeneration in the sea cucumber Apostichopus japonicus.

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The art of microRNA research

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Expression of immune-related genes in embryos and larvae of sea cucumber Apostichopus japonicus

1 reference

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Molecular cloning and characterization of alpha 2-macroglobulin (alpha2-M) from the haemocytes of Chinese mitten crab Eriocheir sinensis

1 reference

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Got target? Computational methods for microRNA target prediction and their extension

1 reference

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Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

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How does multiple testing correction work?

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Computational challenges in miRNA target predictions: to be or not to be a true target?

1 reference

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Characterization of an i-type lysozyme gene from the sea cucumber Stichopus japonicus, and enzymatic and nonenzymatic antimicrobial activities of its recombinant protein

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TopHat: discovering splice junctions with RNA-Seq

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MicroRNA target prediction by expression analysis of host genes

1 reference

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RNA-Seq: a revolutionary tool for transcriptomics

1 reference

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Using expression profiling data to identify human microRNA targets

1 reference

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Human MicroRNA targets

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MicroRNAs: genomics, biogenesis, mechanism, and function

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MicroRNA targets in Drosophila

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Identification of the pathogens associated with skin ulceration and peristome tumescence in cultured sea cucumbers Apostichopus japonicus (Selenka).

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Molecular characterization and expression analysis of a complement component 3 in the sea cucumber (Apostichopus japonicus).

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10.1371/JOURNAL.PONE.0073506

1 reference

Europe PubMed Central

5 August 2017

2013PLoSO...873506Z

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1 reference

Europe PubMed Central

5 August 2017

1 reference

Europe PubMed Central

5 August 2017

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