(Q35004559)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

title

Binding of NF-κB to nucleosomes: effect of translational positioning, nucleosome remodeling and linker histone H1 (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

0 references

John Lalith Charles Richard

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Dimitar Angelov

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

author name string

Imtiaz Nisar Lone

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Manu Shubhdarshan Shukla

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Zahary Yordanov Peshev

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Stefan Dimitrov

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

publication date

26 September 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

issue

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

page(s)

e1003830

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

26 February 2020

copyright license

start time

26 September 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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NF-κB and chromatin: ten years on the path from basic mechanisms to candidate drugs

8 July 2018

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NF-κB regulation: lessons from structures

8 July 2018

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Principles of dimer-specific gene regulation revealed by a comprehensive characterization of NF-κB family DNA binding

8 July 2018

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Base excision repair of 8-oxoG in dinucleosomes

8 July 2018

1 reference

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Extensive characterization of NF-κB binding uncovers non-canonical motifs and advances the interpretation of genetic functional traits.

8 July 2018

1 reference

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H2A.Z Maintenance during Mitosis Reveals Nucleosome Shifting on Mitotically Silenced Genes

8 July 2018

1 reference

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Specialized chromatin patterns in the control of inflammatory gene expression

8 July 2018

1 reference

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Nucleosome dynamics and epigenetic stability.

8 July 2018

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Single-base resolution mapping of H1-nucleosome interactions and 3D organization of the nucleosome

8 July 2018

1 reference

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Remosomes: RSC generated non-mobilized particles with approximately 180 bp DNA loosely associated with the histone octamer.

8 July 2018

1 reference

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H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

8 July 2018

1 reference

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A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling

8 July 2018

1 reference

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New regulators of NF-kappaB in inflammation

8 July 2018

1 reference

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ATP-dependent chromatin remodeling is required for base excision repair in conventional but not in variant H2A.Bbd nucleosomes.

8 July 2018

1 reference

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High-resolution profiling of histone methylations in the human genome

8 July 2018

1 reference

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Epigenetic determination of a cell-specific gene expression program by ATF-2 and the histone variant macroH2A.

8 July 2018

1 reference

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Determinants of histone H1 mobility and chromatin binding in living cells.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Tuning up inflammation: how DNA sequence and chromatin organization control the induction of inflammatory genes by NF-kappaB.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

NF-kappaB: linking inflammation and immunity to cancer development and progression

8 July 2018

1 reference

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Interactions of NF-kappaB with chromatin: the art of being at the right place at the right time

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Origin of the heterogeneous distribution of the yield of guanyl radical in UV laser photolyzed DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Rapid spontaneous accessibility of nucleosomal DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Functional role of extranucleosomal DNA and the entry site of the nucleosome in chromatin remodeling by ISW2.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

8 July 2018

Signaling to NF-kappaB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

The histone octamer is invisible when NF-kappaB binds to the nucleosome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Is NF-kappaB a useful therapeutic target in rheumatoid arthritis?

8 July 2018

1 reference

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Two waves of nuclear factor kappaB recruitment to target promoters

8 July 2018

1 reference

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Dynamic binding of histone H1 to chromatin in living cells

8 July 2018

1 reference

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Linker histone binding and displacement: versatile mechanism for transcriptional regulation

8 July 2018

1 reference

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UV laser footprinting and protein-DNA crosslinking. Application to chromatin.

8 July 2018

1 reference

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Expression and purification of recombinant histones and nucleosome reconstitution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Rapid and selective remodeling of a positioned nucleosome during the induction of IL-12 p40 transcription

8 July 2018

1 reference

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Interleukin-6 repression is associated with a distinctive chromatin structure of the gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Ultraviolet laser footprinting of histone H1(0)-four-way junction DNA complexes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Histone octamer transfer by a chromatin-remodeling complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Promoter structure and transcriptional activation with chromatin templates assembled in vitro. A single Gal4-VP16 dimer binds to chromatin or to DNA with comparable affinity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Persistent interactions of core histone tails with nucleosomal DNA following acetylation and transcription factor binding

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Prolonged glucocorticoid exposure dephosphorylates histone H1 and inactivates the MMTV promoter

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Crystal structure of p50/p65 heterodimer of transcription factor NF-kappaB bound to DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Structure of the human NF-kappaB p52 homodimer-DNA complex at 2.1 A resolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Crystal structure of the nucleosome core particle at 2.8 A resolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Binding of NF1 to the MMTV promoter in nucleosomes: influence of rotational phasing, translational positioning and histone H1.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Transcription factor access to chromatin

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Influence of the local helical conformation on the guanine modifications generated from one-electron DNA oxidation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

SWI/SNF stimulates the formation of disparate activator-nucleosome complexes but is partially redundant with cooperative binding.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

RSC, an essential, abundant chromatin-remodeling complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Linker histone-dependent DNA structure in linear mononucleosomes.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Facilitated binding of TATA-binding protein to nucleosomal DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Binding of disparate transcriptional activators to nucleosomal DNA is inherently cooperative

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Structure of the NF-kappa B p50 homodimer bound to DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Activation of the HIV-1 enhancer by the LEF-1 HMG protein on nucleosome-assembled DNA in vitro

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Transcription factor-mediated chromatin remodelling: mechanisms and models.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Structure of NF-kappa B p50 homodimer bound to a kappa B site

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Reversible association of calf thymus histones to form the symmetrical octamer (H2AH2BH3H4)2: a case of a mixed-associating system.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Identification and purification of a human immunoglobulin-enhancer-binding protein (NF-kappa B) that activates transcription from a human immunodeficiency virus type 1 promoter in vitro

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Multiple nuclear factors interact with the immunoglobulin enhancer sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Nucleosome loss activates yeast downstream promoters in vivo

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Specific glucocorticoid receptor binding to DNA reconstituted in a nucleosome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

NF-kappa B: a pleiotropic mediator of inducible and tissue-specific gene control

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Role of trans-activating proteins in the generation of active chromatin at the PHO5 promoter in S. cerevisiae.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Nucleosome positioning modulates accessibility of regulatory proteins to the mouse mammary tumor virus promoter

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Transcription factor access is mediated by accurately positioned nucleosomes on the mouse mammary tumor virus promoter.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Selection of optimal kappa B/Rel DNA-binding motifs: interaction of both subunits of NF-kappa B with DNA is required for transcriptional activation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3784511

Stable co-occupancy of transcription factors and histones at the HIV-1 enhancer

8 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003830

Selective and antagonistic functions of SWI/SNF and Mi-2beta nucleosome remodeling complexes during an inflammatory response

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003830

The core histone tail domains contribute to sequence-dependent nucleosome positioning.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003830

Histone octamer instability under single molecule experiment conditions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003830

Nucleosomal stability and dynamics vary significantly when viewed by internal versus terminal labels

21 January 2018

1 reference

12 December 2020

Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites

1 reference

12 December 2020

Association of newly synthesized histones with replicating and nonreplicating regions of chromatin

1 reference

12 December 2020

Transcriptional regulation of the HIV-1 promoter by NF-kappa B in vitro

1 reference

12 December 2020

New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.1003830

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

release_tkhbmf44abfnjd5pplmhe7zyx4

26 February 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/tkhbmf44abfnjd5pplmhe7zyx4

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

PubMed publication ID

24086160

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24086160%20AND%20SRC:MED&resulttype=core&format=json