(Q35044740)

6 August 2017

Relationship of DNA methylation and gene expression in idiopathic pulmonary fibrosis (English)

1 reference

6 August 2017

0 references

1 reference

15

John Quackenbush

0 references

Naftali Kaminski

object named as

Naftali Kaminski

17

0 references

Frank Sciurba

object named as

Frank C Sciurba

14

0 references

author name string

Ivana V Yang

1

1 reference

6 August 2017

Brent S Pedersen

2

1 reference

6 August 2017

Einat Rabinovich

3

1 reference

6 August 2017

Corinne E Hennessy

4

1 reference

6 August 2017

Elizabeth J Davidson

5

1 reference

6 August 2017

Elissa Murphy

6

1 reference

6 August 2017

Brenda Juan Guardela

7

1 reference

6 August 2017

John R Tedrow

8

1 reference

6 August 2017

Yingze Zhang

9

1 reference

6 August 2017

Mandal K Singh

10

1 reference

6 August 2017

Mick Correll

11

1 reference

6 August 2017

Marvin I Schwarz

12

1 reference

6 August 2017

Mark Geraci

13

1 reference

6 August 2017

Avrum Spira

16

1 reference

6 August 2017

David A Schwartz

18

1 reference

6 August 2017

language of work or name

English

0 references

publication date

1 December 2014

1 reference

American Journal of Respiratory and Critical Care Medicine

6 August 2017

1 reference

6 August 2017

190

1 reference

6 August 2017

11

1 reference

6 August 2017

1263-1272

1 reference

describes a project that uses

6 August 2017

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/4315819

based on heuristic

inferred from PubMed Central ID database lookup

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8 July 2018

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Endothelial progenitor cells in the pathogenesis of idiopathic pulmonary fibrosis: an evolving concept

8 July 2018

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Integrin-mediated regulation of TGFβ in fibrosis

8 July 2018

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Hypermethylation-mediated silencing of p14(ARF) in fibroblasts from idiopathic pulmonary fibrosis.

8 July 2018

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Altered DNA methylation profile in idiopathic pulmonary fibrosis

8 July 2018

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Functions of DNA methylation: islands, start sites, gene bodies and beyond

8 July 2018

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Global methylation patterns in idiopathic pulmonary fibrosis

8 July 2018

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Cigarette smoking behaviors and time since quitting are associated with differential DNA methylation across the human genome

8 July 2018

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Matrix eQTL: ultra fast eQTL analysis via large matrix operations

8 July 2018

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Coordinated DNA methylation and gene expression changes in smoker alveolar macrophages: specific effects on VEGF receptor 1 expression

8 July 2018

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Methylation of Wnt7a is modulated by DNMT1 and cigarette smoke condensate in non-small cell lung cancer

8 July 2018

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Using probabilistic estimation of expression residuals (PEER) to obtain increased power and interpretability of gene expression analyses

8 July 2018

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EGFL7: a unique angiogenic signaling factor in vascular development and disease

8 July 2018

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EZH2 Mediates epigenetic silencing of neuroblastoma suppressor genes CASZ1, CLU, RUNX3, and NGFR

8 July 2018

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Evolving genomic approaches to idiopathic pulmonary fibrosis: moving beyond genes

8 July 2018

1 reference

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Epigenetic control of gene expression in the lung

8 July 2018

1 reference

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Alveolar epithelial cells express mesenchymal proteins in patients with idiopathic pulmonary fibrosis

8 July 2018

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Essential role of MeCP2 in the regulation of myofibroblast differentiation during pulmonary fibrosis

8 July 2018

1 reference

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DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines

8 July 2018

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Global profiling and molecular characterization of alternative splicing events misregulated in lung cancer

8 July 2018

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Accurate genome-scale percentage DNA methylation estimates from microarray data

8 July 2018

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Epigenetic regulation of thy-1 by histone deacetylase inhibitor in rat lung fibroblasts.

8 July 2018

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Comprehensive methylome map of lineage commitment from haematopoietic progenitors

8 July 2018

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Inhibition of Wnt/beta-catenin/CREB binding protein (CBP) signaling reverses pulmonary fibrosis

8 July 2018

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8 July 2018

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Epigenetic regulation of myofibroblast differentiation by DNA methylation

8 July 2018

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Structure, mechanism and inhibition of gamma-secretase and presenilin-like proteases

8 July 2018

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A Bayesian framework to account for complex non-genetic factors in gene expression levels greatly increases power in eQTL studies

8 July 2018

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Repression of IP-10 by interactions between histone deacetylation and hypermethylation in idiopathic pulmonary fibrosis

8 July 2018

1 reference

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Genetic control of individual differences in gene-specific methylation in human brain.

8 July 2018

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Increased local expression of coagulation factor X contributes to the fibrotic response in human and murine lung injury.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

Defective histone acetylation is responsible for the diminished expression of cyclooxygenase 2 in idiopathic pulmonary fibrosis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

The Foxc2 transcription factor regulates angiogenesis via induction of integrin beta3 expression

8 July 2018

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Comprehensive high-throughput arrays for relative methylation (CHARM).

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

Environmental epigenomics and disease susceptibility

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

Comparison of normalization methods for CodeLink Bioarray data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

Circulating fibrocytes traffic to the lungs in response to CXCL12 and mediate fibrosis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

Gene expression analysis reveals matrilysin as a key regulator of pulmonary fibrosis in mice and humans

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

Cigarette smoking: a risk factor for idiopathic pulmonary fibrosis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

Expression of cilium-associated genes defines novel molecular subtypes of idiopathic pulmonary fibrosis

8 July 2018

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21 January 2018

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21 January 2018

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Divergence of tight and adherens junction factors in alveolar epithelium in pulmonary fibrosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1164%2FRCCM.201408-1452OC

A direct interaction between transforming growth factor (TGF)-betas and amyloid-beta protein affects fibrillogenesis in a TGF-beta receptor-independent manner.

21 January 2018

1 reference

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Targeted p16(Ink4a) epimutation causes tumorigenesis and reduces survival in mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1164%2FRCCM.201408-1452OC

Idiopathic pulmonary fibrosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1164%2FRCCM.201408-1452OC

Differential regulation of CASZ1 protein expression during cardiac and skeletal muscle development

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

p16(INK4a) and histology-specific methylation of CpG islands by exposure to tobacco smoke in non-small cell lung cancer.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4315819

Comprehensive high-throughput arrays for relative methylation (CHARM)

25 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25333685

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1164/RCCM.201408-1452OC

1 reference

6 August 2017

1 reference

6 August 2017

1 reference