(Q35050923)

6 August 2017

Too much of a good thing: the unique and repeated paths toward copper adaptation (English)

1 reference

6 August 2017

6

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6 August 2017

Jasmine Ono

2

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Aleeza C Gerstein

object named as

Aleeza C Gerstein

1

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author name string

Dara S Lo

3

1 reference

6 August 2017

Marcus L Campbell

4

1 reference

6 August 2017

Anastasia Kuzmin

5

1 reference

6 August 2017

language of work or name

English

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publication date

17 December 2014

1 reference

6 August 2017

17

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inferred from page(s)

published in

Genetics

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6 August 2017

199

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6 August 2017

2

1 reference

6 August 2017

555-571

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describes a project that uses

6 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4317662/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Structures of naturally evolved CUP1 tandem arrays in yeast indicate that these arrays are generated by unequal nonhomologous recombination

8 July 2018

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Determination and inference of eukaryotic transcription factor sequence specificity

8 July 2018

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Using next-generation sequencing to isolate mutant genes from forward genetic screens

8 July 2018

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Microbial evolution. Global epistasis makes adaptation predictable despite sequence-level stochasticity

8 July 2018

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Loss-of-heterozygosity facilitates passage through Haldane's sieve for Saccharomyces cerevisiae undergoing adaptation

8 July 2018

1 reference

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The sister chromatid cohesion pathway suppresses multiple chromosome gain and chromosome amplification.

8 July 2018

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The genetic causes of convergent evolution

8 July 2018

1 reference

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Pervasive genetic hitchhiking and clonal interference in forty evolving yeast populations

8 July 2018

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Parallel evolutionary dynamics of adaptive diversification in Escherichia coli

8 July 2018

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Gene copy-number variation in haploid and diploid strains of the yeast Saccharomyces cerevisiae

8 July 2018

1 reference

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Chromosomal duplication is a transient evolutionary solution to stress.

8 July 2018

1 reference

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Genomics of adaptation during experimental evolution of the opportunistic pathogen Pseudomonas aeruginosa

8 July 2018

1 reference

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Parallel genetic changes and nonparallel gene-environment interactions characterize the evolution of drug resistance in yeast

8 July 2018

1 reference

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YeastMine--an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit.

8 July 2018

1 reference

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Hunger artists: yeast adapted to carbon limitation show trade-offs under carbon sufficiency

8 July 2018

1 reference

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Diminishing returns epistasis among beneficial mutations decelerates adaptation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Reciprocal sign epistasis between frequently experimentally evolved adaptive mutations causes a rugged fitness landscape

8 July 2018

1 reference

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Adaptation of Saccharomyces cerevisiae to saline stress through laboratory evolution

8 July 2018

1 reference

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Mutational effects and population dynamics during viral adaptation challenge current models

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Parallel evolution in Pseudomonas aeruginosa over 39,000 generations in vivo.

8 July 2018

1 reference

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Convergence in pigmentation at multiple levels: mutations, genes and function

8 July 2018

1 reference

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Annotating non-coding regions of the genome

8 July 2018

1 reference

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Cryptococcus neoformans overcomes stress of azole drugs by formation of disomy in specific multiple chromosomes

8 July 2018

1 reference

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Acquisition of aneuploidy provides increased fitness during the evolution of antifungal drug resistance

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Validation of reference genes for quantitative expression analysis by real-time RT-PCR in Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

The Sequence Alignment/Map format and SAMtools

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

The causes of repeated genetic evolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Clonal interference, multiple mutations and adaptation in large asexual populations

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

A genome-wide view of the spectrum of spontaneous mutations in yeast.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Four linked genes participate in controlling sporulation efficiency in budding yeast

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

The exchangeability of amino acids in proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Chance caught on the wing: cis-regulatory evolution and the origin of pigment patterns in Drosophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Parallel evolution and inheritance of quantitative traits

8 July 2018

1 reference

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FunSpec: a web-based cluster interpreter for yeast

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Functional profiling of the Saccharomyces cerevisiae genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Perspective: Evolutionary developmental biology and the problem of variation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

A delicate balance: homeostatic control of copper uptake and distribution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Evolution by small steps and rugged landscapes in the RNA virus phi6

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Copper-mediated repression of the activation domain in the yeast Mac1p transcription factor

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Tandem gene amplification mediates copper resistance in yeast

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Nystatin-Resistant Mutants of Yeast: Alterations in Sterol Content

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Gene conversions within the Cup1r region from heterologous crosses in Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Mutation spectrum of copper-induced DNA damage

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Gene amplification in yeast: CUP1 copy number regulates copper resistance

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

The Loci of repeated evolution: a catalog of genetic hotspots of phenotypic variation.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

The probability of genetic parallelism and convergence in natural populations.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

The molecular diversity of adaptive convergence.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Isolation and biomass production of a Saccharomyces cerevisiae strain binding copper and zinc ions.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Quantitative trait loci mapped to single-nucleotide resolution in yeast

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Fitness effects of fixed beneficial mutations in microbial populations.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

The activity of plasma membrane H(+)-ATPase is strongly stimulated during Saccharomyces cerevisiae adaptation to growth under high copper stress, accompanying intracellular acidification

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4317662

Modification of plasma membrane lipid order and H + -ATPase activity as part of the response of Saccharomyces cerevisiae to cultivation under mild and high copper stress

25 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25519894

12 December 2020

inferred from PubMed ID database lookup

Genotoxicity and mutagenicity of iron and copper in mice

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25519894

12 December 2020

inferred from PubMed ID database lookup

Amplification of the CUP1 gene is associated with evolution of copper tolerance in Saccharomyces cerevisiae

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25519894

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1534/GENETICS.114.171124

1 reference

6 August 2017

1 reference

6 August 2017

1 reference