(Q35089075)

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Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach

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scholarly article

1 reference

Europe PubMed Central

6 August 2017

Network topology and parameter estimation: from experimental design methods to gene regulatory network kinetics using a community based approach (English)

1 reference

Europe PubMed Central

6 August 2017

Thomas Cokelaer

object named as

Thomas Cokelaer

2

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Julio Saez-Rodriguez

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Julio Saez-Rodriguez

16

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object named as

Clemens Kreutz

9

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8

object named as

Bonnie Berger

1 reference

Europe PubMed Central

6 August 2017

Gustavo Stolovitzky

15

object named as

Gustavo Stolovitzky

1 reference

Europe PubMed Central

6 August 2017

1

object named as

Pablo Meyer

1 reference

Europe PubMed Central

6 August 2017

Herbert M. Sauro

14

object named as

Herbert M Sauro

1 reference

Europe PubMed Central

6 August 2017

Devesh Bhimsaria

1 reference

ORCID Public Data File 2021

author name string

Deepak Chandran

3

1 reference

Europe PubMed Central

6 August 2017

Kyung Hyuk Kim

4

1 reference

Europe PubMed Central

6 August 2017

Po-Ru Loh

5

1 reference

Europe PubMed Central

6 August 2017

George Tucker

6

1 reference

Europe PubMed Central

6 August 2017

Mark Lipson

7

1 reference

Europe PubMed Central

6 August 2017

Andreas Raue

10

1 reference

Europe PubMed Central

6 August 2017

Bernhard Steiert

11

1 reference

Europe PubMed Central

6 August 2017

Jens Timmer

12

1 reference

Europe PubMed Central

6 August 2017

Erhan Bilal

13

1 reference

Europe PubMed Central

6 August 2017

publication date

7 February 2014

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Europe PubMed Central

6 August 2017

BMC Systems Biology

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Europe PubMed Central

6 August 2017

8

1 reference

Europe PubMed Central

6 August 2017

13

1 reference

Europe PubMed Central

6 August 2017

https://scigraph.springernature.com/pub.10.1186/1752-0509-8-13

0 references

Maximizing the information content of experiments in systems biology

1 reference

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8 July 2018

Genetic programs constructed from layered logic gates in single cells

1 reference

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A whole-cell computational model predicts phenotype from genotype

1 reference

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8 July 2018

Experimental design for parameter estimation of gene regulatory networks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927870

8 July 2018

Wisdom of crowds for robust gene network inference

1 reference

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8 July 2018

Mass spectrometry-based proteomics for systems biology

1 reference

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Stochastic pulse regulation in bacterial stress response

1 reference

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Crowdsourcing network inference: the DREAM predictive signaling network challenge

1 reference

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8 July 2018

Parameter estimation using meta-heuristics in systems biology: a comprehensive review

1 reference

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8 July 2018

When the optimal is not the best: parameter estimation in complex biological models

1 reference

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8 July 2018

Advantages and limitations of current network inference methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927870

8 July 2018

Revealing strengths and weaknesses of methods for gene network inference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927870

8 July 2018

Towards a rigorous assessment of systems biology models: the DREAM3 challenges

1 reference

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8 July 2018

A synchronized quorum of genetic clocks

1 reference

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TinkerCell: modular CAD tool for synthetic biology

1 reference

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8 July 2018

Quantitative time-lapse fluorescence microscopy in single cells

1 reference

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8 July 2018

Systems biology: experimental design

1 reference

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8 July 2018

Parameter estimation and determinability analysis applied to Drosophila gap gene circuits

1 reference

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8 July 2018

Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution.

1 reference

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Optimization in computational systems biology

1 reference

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8 July 2018

Applications of fluorescence microscopy to single bacterial cells

1 reference

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8 July 2018

Dynamic modelling and analysis of biochemical networks: mechanism-based models and model-based experiments.

1 reference

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8 July 2018

An excitable gene regulatory circuit induces transient cellular differentiation

1 reference

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8 July 2018

Stochastic gene expression in a single cell

1 reference

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8 July 2018

Properties of cell death models calibrated and compared using Bayesian approaches

1 reference

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27 September 2018

Use of fluorescence microscopy to analyze genetic circuit dynamics.

1 reference

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27 September 2018

Identifiability and observability analysis for experimental design in nonlinear dynamical models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3927870

27 September 2018

Identifiers

10.1186/1752-0509-8-13

1 reference

Europe PubMed Central

6 August 2017

DBLP publication ID

journals/bmcsb/MeyerCCKLTLBKRSTBSSS14

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

0 references

1 reference

Europe PubMed Central

6 August 2017

1 reference

Europe PubMed Central

6 August 2017

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