(Q35092901)

6 August 2017

title

Optimising chemical named entity recognition with pre-processing analytics, knowledge-rich features and heuristics (English)

1 reference

6 August 2017

main subject

named-entity recognition

1 reference

3

Sophia Ananiadou

1 reference

6 August 2017

1

Riza Batista-Navarro

1 reference

6 August 2017

Rafal Rak

2

1 reference

6 August 2017

language of work or name

1 reference

19 January 2015

1 reference

Journal of Cheminformatics

6 August 2017

published in

1 reference

6 August 2017

volume

7

1 reference

6 August 2017

issue

Suppl 1 Text mining for chemistry and the CHEMDNER trac

1 reference

6 August 2017

page(s)

S6

1 reference

Creative Commons Attribution 4.0 International

6 August 2017

copyright license

start time

19 January 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/1758-2946-7-s1-s6

0 references

cites work

Chemical Entity Recognition and Resolution to ChEBI.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

The CHEMDNER corpus of chemicals and drugs and its annotation principles

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

CHEMDNER: The drugs and chemical names extraction challenge

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

Processing biological literature with customizable Web services supporting interoperable formats

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

Text mining effectively scores and ranks the literature for improving chemical-gene-disease curation at the comparative toxicogenomics database

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

Biological network extraction from scientific literature: state of the art and challenges

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

An integrated pharmacokinetics ontology and corpus for text mining

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

The Comparative Toxicogenomics Database: update 2013.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

ChemSpot: a hybrid system for chemical named entity recognition

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

Argo: an integrative, interactive, text mining-based workbench supporting curation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

OSCAR4: a flexible architecture for chemical text-mining

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

Mining metabolites: extracting the yeast metabolome from the literature

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

Using workflows to explore and optimise named entity recognition for chemistry

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

Drug repurposing and adverse event prediction using high-throughput literature analysis

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

DrugBank 3.0: a comprehensive resource for 'omics' research on drugs

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

CALBC silver standard corpus

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

A dictionary to identify small molecules and drugs in free text

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

Cascaded classifiers for confidence-based chemical named entity recognition

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

HMDB: a knowledgebase for the human metabolome

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

Mining chemical structural information from the drug literature

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

A simple algorithm for identifying abbreviation definitions in biomedical text.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4331696

The DDI corpus: an annotated corpus with pharmacological substances and drug-drug interactions

9 July 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25810777

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Text Mining for Drugs and Chemical Compounds: Methods, Tools and Applications

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25810777

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Extracting drug-drug interactions from biomedical texts.

1 reference

COCI

https://opencitations.net/index/coci/api/v1/references/10.1186/1758-2946-7-S1-S6

10.1186/1758-2946-7-S1-S6

2 January 2022

Identifiers

DOI

1 reference

journals/jcheminf/Batista-NavarroRA15

6 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

6 August 2017

1 reference