(Q35101737)

English

Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding lines

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scholarly article

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Europe PubMed Central

PubMed publication ID

6 August 2017

Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding lines (English)

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Europe PubMed Central

PubMed publication ID

6 August 2017

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corrigendum / erratum

Correction: Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Br

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Bertrand Collard

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Bertrand Collard

5

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Jean-Luc Jannink

8

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Jean-Luc Jannink

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Europe PubMed Central

PubMed publication ID

6 August 2017

author name string

Jennifer Spindel

1

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Europe PubMed Central

PubMed publication ID

6 August 2017

Hasina Begum

2

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Europe PubMed Central

PubMed publication ID

6 August 2017

Deniz Akdemir

3

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Europe PubMed Central

PubMed publication ID

6 August 2017

Parminder Virk

4

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Europe PubMed Central

PubMed publication ID

6 August 2017

Edilberto Redoña

6

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Europe PubMed Central

PubMed publication ID

6 August 2017

Gary Atlin

7

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Europe PubMed Central

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6 August 2017

Susan R McCouch

9

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Europe PubMed Central

PubMed publication ID

6 August 2017

publication date

17 February 2015

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Europe PubMed Central

PubMed publication ID

6 August 2017

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Europe PubMed Central

PubMed publication ID

6 August 2017

11

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Europe PubMed Central

PubMed publication ID

6 August 2017

2

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Europe PubMed Central

PubMed publication ID

6 August 2017

e1004982

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Europe PubMed Central

PubMed publication ID

6 August 2017

copyright license

Creative Commons CC0 License

17 February 2015

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April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

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1 reference

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Characterization of epistatic interaction of QTLs LH8 and EH3 controlling heading date in rice

1 reference

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Multiple major QTL lead to stable yield performance of rice cultivars across varying drought intensities

1 reference

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1 reference

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A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

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Prediction of genetic values of quantitative traits in plant breeding using pedigree and molecular markers.

1 reference

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Genomic diversity and introgression in O. sativa reveal the impact of domestication and breeding on the rice genome

1 reference

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1 reference

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1 reference

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Additive genetic variability and the Bayesian alphabet

1 reference

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Invited review: Genomic selection in dairy cattle: progress and challenges

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Reproducing kernel hilbert spaces regression methods for genomic assisted prediction of quantitative traits

1 reference

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Linkage mapping of domestication loci in a large maize teosinte backcross resource

1 reference

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Marker-assisted selection: an approach for precision plant breeding in the twenty-first century

1 reference

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TASSEL: software for association mapping of complex traits in diverse samples

1 reference

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Substitution mapping of dth1.1, a flowering-time quantitative trait locus (QTL) associated with transgressive variation in rice, reveals multiple sub-QTL

1 reference

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Hd1, a major photoperiod sensitivity quantitative trait locus in rice, is closely related to the Arabidopsis flowering time gene CONSTANS.

1 reference

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Epistasis for three grain yield components in rice (Oryza sativa L.).

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inferred from PubMed ID database lookup

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1 reference

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inferred from PubMed ID database lookup

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1 reference

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1 reference

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inferred from PubMed ID database lookup

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1 reference

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inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PGEN.1004982

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

ResearchGate publication ID

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