(Q35101967)

6 August 2017

Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain R7A (English)

1 reference

6 August 2017

Mesorhizobium loti

1 reference

15

1 reference

6 August 2017

16

1 reference

6 August 2017

9

Tanja Woyke

0 references

Lambert Bräu

5

Lambert Bräu

0 references

Clive Ronson

Clive Ronson

3

0 references

Rui Tian

Rui Tian

4

0 references

Cliff Han

Cliff Han

8

0 references

Victor Markowitz

14

Victor Markowitz

1 reference

6 August 2017

12

Amrita Pati

1 reference

6 August 2017

11

Marcel Huntemann

1 reference

6 August 2017

Konstantinos Mavromatis

13

Konstantinos Mavromatis

1 reference

6 August 2017

7

Lynne Goodwin

1 reference

6 August 2017

17

Wayne Reeve

1 reference

6 August 2017

2

John Sullivan

1 reference

6 August 2017

Simon Kelly

1

1 reference

6 August 2017

Lambert Bräu

5

1 reference

6 August 2017

Christine Munk

6

1 reference

6 August 2017

Tatiparthi Reddy

10

1 reference

6 August 2017

8 December 2014

1 reference

Standards in genomic sciences

6 August 2017

1 reference

6 August 2017

9

1 reference

6 August 2017

6

1 reference

https://scigraph.springernature.com/pub.10.1186/1944-3277-9-6

6 August 2017

0 references

cites work

The NifA-RpoN regulon of Mesorhizobium loti strain R7A and its symbiotic activation by a novel LacI/GalR-family regulator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Using the Velvet de novo assembler for short-read sequencing technologies

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Prodigal: prokaryotic gene recognition and translation initiation site identification

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Nodulation gene mutants of Mesorhizobium loti R7A-nodZ and nolL mutants have host-specific phenotypes on Lotus spp.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

IMG ER: a system for microbial genome annotation expert review and curation

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

The minimum information about a genome sequence (MIGS) specification

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

RNAmmer: consistent and rapid annotation of ribosomal RNA genes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Improved prediction of signal peptides: SignalP 3.0

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Rfam: an RNA family database

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Comparative sequence analysis of the symbiosis island of Mesorhizobium loti strain R7A.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Complete Genome Structure of the Nitrogen-fixing Symbiotic Bacterium Mesorhizobium loti

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Gene ontology: tool for the unification of biology

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Consed: a graphical tool for sequence finishing

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Base-calling of automated sequencer traces using phred. II. Error probabilities

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Base-calling of automated sequencer traces using phred. I. Accuracy assessment

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

9 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

9 July 2018

https://api.crossref.org/works/10.1186%2F1944-3277-9-6

Nodulating strains of Rhizobium loti arise through chromosomal symbiotic gene transfer in the environment

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

R Factor Transfer in Rhizobium leguminosarum

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Rhizobium meliloti ntrA (rpoN) gene is required for diverse metabolic functions

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Conditional requirement for exopolysaccharide in the Mesorhizobium-Lotus symbiosis.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

A widely conserved molecular switch controls quorum sensing and symbiosis island transfer in Mesorhizobium loti through expression of a novel antiactivator

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

List of new names and new combinations previously effectively, but not validly, published

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

Analysis of cellular fatty acids and phenotypic relationships of Agrobacterium, Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium species using the Sherlock Microbial Identification System

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4334631

OGtree: a tool for creating genome trees of prokaryotes based on overlapping genes

27 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1944-3277-9-6

Symbiotic phenotypes and translocated effector proteins of the Mesorhizobium loti strain R7A VirB/D4 type IV secretion system

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25780499

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Excision and transfer of the Mesorhizobium loti R7A symbiosis island requires an integrase IntS, a novel recombination directionality factor RdfS, and a putative relaxase RlxS

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25780499

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25780499

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1944-3277-9-6

1 reference

Dimensions Publication ID

6 August 2017

0 references

1 reference

6 August 2017

1 reference