(Q35131776)

6 August 2017

Effects of cytosine methylation on transcription factor binding sites (English)

1 reference

6 August 2017

0 references

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Vladimir B. Bajic

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Yulia Medvedeva

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Abdullah M Khamis

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Wail Ba Alawi

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Hideya Kawaji

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Matthias Harbers

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

Alistair Forrest

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

3

Ivan V Kulakovskiy

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

author name string

Md Shariful I Bhuyan

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

FANTOM consortium

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

language of work or name

English

0 references

publication date

26 March 2014

1 reference

6 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

page(s)

119

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/1471-2164-15-119

11 June 2020

exact match

0 references

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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5-Hydroxymethylcytosine is associated with enhancers and gene bodies in human embryonic stem cells

13 July 2018

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13 July 2018

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13 July 2018

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Epigenetic regulation of pluripotency

13 July 2018

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13 July 2018

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CpG methylation of half-CRE sequences creates C/EBPalpha binding sites that activate some tissue-specific genes

13 July 2018

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13 July 2018

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Genome-wide conserved consensus transcription factor binding motifs are hyper-methylated

13 July 2018

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Dinucleotide weight matrices for predicting transcription factor binding sites: generalizing the position weight matrix

13 July 2018

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Human aging-associated DNA hypermethylation occurs preferentially at bivalent chromatin domains

13 July 2018

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General transcription factor binding at CpG islands in normal cells correlates with resistance to de novo DNA methylation in cancer cells

13 July 2018

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Dynamic changes in the human methylome during differentiation

13 July 2018

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The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing

13 July 2018

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13 July 2018

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13 July 2018

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Integration of data obtained by different experimental methods to determine the motifs in DNA sequences recognized by transcription-regulating factors

13 July 2018

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Human DNA methylomes at base resolution show widespread epigenomic differences

13 July 2018

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Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context

13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

13 July 2018

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G9a/GLP complexes independently mediate H3K9 and DNA methylation to silence transcription

13 July 2018

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Genome-scale DNA methylation maps of pluripotent and differentiated cells

13 July 2018

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Global mapping of DNA methylation in mouse promoters reveals epigenetic reprogramming of pluripotency genes

13 July 2018

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DNA methylation landscapes: provocative insights from epigenomics

13 July 2018

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Nutritional control of reproductive status in honeybees via DNA methylation

13 July 2018

1 reference

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Transient cyclical methylation of promoter DNA.

13 July 2018

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Cyclical DNA methylation of a transcriptionally active promoter

13 July 2018

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Genome-wide profiling of DNA methylation reveals a class of normally methylated CpG island promoters

13 July 2018

1 reference

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Environmental epigenomics and disease susceptibility

13 July 2018

1 reference

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Covalent modification of DNA regulates memory formation

13 July 2018

1 reference

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Cancer epigenomics: DNA methylomes and histone-modification maps

13 July 2018

1 reference

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Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

13 July 2018

1 reference

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DNA methylation regulates long-range gene silencing of an X-linked homeobox gene cluster in a lineage-specific manner

13 July 2018

1 reference

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DNA methylation profiling of human chromosomes 6, 20 and 22

13 July 2018

1 reference

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G9a-mediated irreversible epigenetic inactivation of Oct-3/4 during early embryogenesis.

13 July 2018

1 reference

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The Polycomb group protein EZH2 directly controls DNA methylation

13 July 2018

1 reference

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Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis

13 July 2018

1 reference

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In vivo transcriptional regulation of N-Myc target genes is controlled by E-box methylation

13 July 2018

1 reference

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Epigenetic differences arise during the lifetime of monozygotic twins

13 July 2018

1 reference

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Chromatin inactivation precedes de novo DNA methylation during the progressive epigenetic silencing of the RASSF1A promoter

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide

13 July 2018

1 reference

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The history of cancer epigenetics

13 July 2018

1 reference

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Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals

13 July 2018

1 reference

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DNA methylation in cancer: too much, but also too little

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

The p120(ctn)-binding partner Kaiso is a bi-modal DNA-binding protein that recognizes both a sequence-specific consensus and methylated CpG dinucleotides

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

The role of DNA methylation in mammalian epigenetics

13 July 2018

1 reference

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Methylated cytosine and the brain: a new base for neuroscience

13 July 2018

1 reference

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Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Modulation of DNA binding protein affinity directly affects target site demethylation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Epigenetics: regulation through repression

13 July 2018

1 reference

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The DNA methylation paradox

13 July 2018

1 reference

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Cytosine methylation and mammalian development

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

The primary function of a redundant Sp1 binding site in the mouse aprt gene promoter is to block epigenetic gene inactivation

13 July 2018

1 reference

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Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex

13 July 2018

1 reference

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Effects of DNA methylation on DNA-binding proteins and gene expression.

13 July 2018

1 reference

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Sp1 elements protect a CpG island from de novo methylation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Sp1 sites in the mouse aprt gene promoter are required to prevent methylation of the CpG island

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Amount and distribution of 5-methylcytosine in human DNA from different types of tissues of cells

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

In vitro methylation of the hamster adenine phosphoribosyltransferase gene inhibits its expression in mouse L cells

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Information content of binding sites on nucleotide sequences

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Repression of genes by DNA methylation depends on CpG density and promoter strength: evidence for involvement of a methyl-CpG binding protein

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

X inactivation, differentiation, and DNA methylation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Regional differences in gene expression and promoter usage in aged human brains.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

DNA-binding factors shape the mouse methylome at distal regulatory regions

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Identification of genetic elements that autonomously determine DNA methylation states.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Targets and dynamics of promoter DNA methylation during early mouse development.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Efficient and accurate P-value computation for Position Weight Matrices

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Methylation-sensitive binding of transcription factor YY1 to an insulator sequence within the paternally expressed imprinted gene, Peg3.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Cancer epigenetics and methylation

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

Dependence of transcriptional repression on CpG methylation density

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986887

An integrated encyclopedia of DNA elements in the human genome

27 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-15-119

Computer model for recognition of functional transcription start sites in RNA polymerase II promoters of vertebrates

21 January 2018

2 references

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-15-119

21 January 2018

12 December 2020

DNA modification mechanisms and gene activity during development

1 reference

12 December 2020

DNA methylation: Bisulphite modification and analysis

1 reference

12 December 2020

DNA methylation versus gene expression

1 reference

12 December 2020

A differentially methylated single CpG-site is correlated with estrogen receptor alpha transcription

1 reference

12 December 2020

Molecular biology. Epigenetic islands in a genetic ocean

1 reference

12 December 2020

Functions for DNA Methylation in Vertebrates

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-15-119

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

11 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json

11 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24669864%20AND%20SRC:MED&resulttype=core&format=json