(Q35183014)

7 August 2017

title

Interaction of RNA polymerase II fork loop 2 with downstream non-template DNA regulates transcription elongation (English)

1 reference

7 August 2017

3

Benoit Coulombe

1 reference

7 August 2017

2

Céline Domecq

1 reference

7 August 2017

Maria L Kireeva

1

1 reference

7 August 2017

Zachary F Burton

series ordinal

4

1 reference

7 August 2017

Mikhail Kashlev

series ordinal

5

1 reference

7 August 2017

language of work or name

English

0 references

publication date

5 July 2011

1 reference

Journal of Biological Chemistry

7 August 2017

published in

1 reference

7 August 2017

volume

286

1 reference

7 August 2017

issue

35

1 reference

7 August 2017

page(s)

30898-30910

1 reference

describes a project that uses

7 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3162450/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Activity map of the Escherichia coli RNA polymerase bridge helix

13 July 2018

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Structural basis of RNA polymerase II backtracking, arrest and reactivation

13 July 2018

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RNA polymerase II with open and closed trigger loops: active site dynamics and nucleic acid translocation

13 July 2018

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13 July 2018

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Conformational coupling, bridge helix dynamics and active site dehydration in catalysis by RNA polymerase

13 July 2018

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13 July 2018

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Nano positioning system reveals the course of upstream and nontemplate DNA within the RNA polymerase II elongation complex

13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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Structure of the 12-subunit RNA polymerase II refined with the aid of anomalous diffraction data

13 July 2018

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Bridge helix and trigger loop perturbations generate superactive RNA polymerases.

13 July 2018

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Structural basis of transcription inhibition by alpha-amanitin and implications for RNA polymerase II translocation

13 July 2018

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Transient reversal of RNA polymerase II active site closing controls fidelity of transcription elongation

13 July 2018

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Structural basis for substrate loading in bacterial RNA polymerase

13 July 2018

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Structural basis for transcription elongation by bacterial RNA polymerase

13 July 2018

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Multisubunit RNA polymerases melt only a single DNA base pair downstream of the active site.

13 July 2018

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Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis

13 July 2018

1 reference

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NTP-driven translocation and regulation of downstream template opening by multi-subunit RNA polymerases

13 July 2018

1 reference

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The highly conserved glutamic acid 791 of Rpb2 is involved in the binding of NTP and Mg(B) in the active center of human RNA polymerase II.

13 July 2018

1 reference

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RPAP1, a novel human RNA polymerase II-associated protein affinity purified with recombinant wild-type and mutated polymerase subunits

13 July 2018

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Downstream DNA sequence effects on transcription elongation. Allosteric binding of nucleoside triphosphates facilitates translocation via a ratchet motion

13 July 2018

1 reference

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Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

13 July 2018

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Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

13 July 2018

1 reference

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Functional interaction between Ssu72 and the Rpb2 subunit of RNA polymerase II in Saccharomyces cerevisiae

13 July 2018

1 reference

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A generic protein purification method for protein complex characterization and proteome exploration

13 July 2018

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The increment of SII-facilitated transcript cleavage varies dramatically between elongation competent and incompetent RNA polymerase II ternary complexes.

13 July 2018

1 reference

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Purified yeast RNA polymerase II reads through intrinsic blocks to elongation in response to the yeast TFIIS analogue, P37.

13 July 2018

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Translocation of the Escherichia coli transcription complex observed in the registers 11 to 20: "jumping" of RNA polymerase and asymmetric expansion and contraction of the "transcription bubble".

13 July 2018

1 reference

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Terminator-distal sequences determine the in vitro efficiency of the early terminators of bacteriophages T3 and T7.

13 July 2018

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Structure-function analysis of the RNA polymerase cleft loops elucidates initial transcription, DNA unwinding and RNA displacement

13 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.260844

Allosteric binding of nucleoside triphosphates to RNA polymerase regulates transcription elongation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.260844

Dynamic error correction and regulation of downstream bubble opening by human RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.260844

NTP-driven translocation by human RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.260844

Crucial role of the RNA:DNA hybrid in the processivity of transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.260844

Transcription factors IIF and IIS and nucleoside triphosphate substrates as dynamic probes of the human RNA polymerase II mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.260844

RNA polymerase switches between inactivated and activated states By translocating back and forth along the DNA and the RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M111.260844

The 8-nucleotide-long RNA:DNA hybrid is a primary stability determinant of the RNA polymerase II elongation complex

21 January 2018

1 reference

12 December 2020

The downstream DNA jaw of bacterial RNA polymerase facilitates both transcriptional initiation and pausing

1 reference

12 December 2020

Downstream DNA selectively affects a paused conformation of human RNA polymerase II

1 reference

12 December 2020

Curvature of dinucleotide poised for formation of trinucleotide in transcription with Escherichia coli RNA polymerase

1 reference

12 December 2020

Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS

1 reference

12 December 2020

Nature of the nucleosomal barrier to RNA polymerase II

1 reference

12 December 2020

Promoter-proximal pausing of RNA polymerase II: an opportunity to regulate gene transcription

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M111.260844

1 reference

release_clpck4dpibalzn32ph6wpc7lwm

7 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/clpck4dpibalzn32ph6wpc7lwm

24 November 2022

mapped directly with Wikidata item

PMC publication ID

3162450

1 reference

7 August 2017

1 reference