(Q35187850)

7 August 2017

title

The American cranberry: first insights into the whole genome of a species adapted to bog habitat (English)

1 reference

7 August 2017

0 references

whole genome sequencing

1 reference

inferred from title

author

Debashish Bhattacharya

6

object named as

Debashish Bhattacharya

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7 August 2017

James Polashock

1

1 reference

7 August 2017

Ehud Zelzion

2

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7 August 2017

Diego Fajardo

3

1 reference

7 August 2017

Juan Zalapa

4

1 reference

7 August 2017

Laura Georgi

5

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7 August 2017

Nicholi Vorsa

7

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7 August 2017

publication date

13 June 2014

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7 August 2017

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7 August 2017

volume

14

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7 August 2017

page(s)

165

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The American cranberry mitochondrial genome reveals the presence of selenocysteine (tRNA-Sec and SECIS) insertion machinery in land plants

7 August 2017

cites work

1 reference

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Jasmonate-Mediated Induced Volatiles in the American Cranberry, Vaccinium macrocarpon: From Gene Expression to Organismal Interactions

13 July 2018

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Plant-pathogen interactions: disease resistance in modern agriculture

13 July 2018

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The genome of melon (Cucumis melo L.).

13 July 2018

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Necrotroph attacks on plants: wanton destruction or covert extortion?

13 July 2018

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Insights into the molecular mechanisms of the anti-atherogenic actions of flavonoids in normal and obese mice

13 July 2018

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Cranberries: ripe for more cancer research?

13 July 2018

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Phylogenetic relationships within the blueberry tribe (Vaccinieae, Ericaceae) based on sequence data from MATK and nuclear ribosomal ITS regions, with comments on the placement of Satyria

13 July 2018

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Scaffolding pre-assembled contigs using SSPACE

13 July 2018

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Cranberry polyphenols: potential benefits for dental caries and periodontal disease

13 July 2018

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De novo assembly and analysis of RNA-seq data.

13 July 2018

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The genome of the domesticated apple (Malus × domestica Borkh.)

13 July 2018

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Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines.

13 July 2018

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Influence of cranberry proanthocyanidins on formation of biofilms by Streptococcus mutans on saliva-coated apatitic surface and on dental caries development in vivo

13 July 2018

1 reference

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Broad-spectrum and durability: understanding of quantitative disease resistance

13 July 2018

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PRGdb: a bioinformatics platform for plant resistance gene analysis

13 July 2018

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Do potatoes and tomatoes have a single evolutionary history, and what proportion of the genome supports this history?

13 July 2018

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ABySS: a parallel assembler for short read sequence data

13 July 2018

1 reference

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Cranberry proanthocyanidins are cytotoxic to human cancer cells and sensitize platinum-resistant ovarian cancer cells to paraplatin

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Assessing the gene space in draft genomes

13 July 2018

1 reference

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The Transporter Classification Database: recent advances

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Bioactive compounds and health-promoting properties of berry fruits: a review

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

A HapMap harvest of insights into the genetics of common disease

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Genome-wide identification of NBS resistance genes in Populus trichocarpa

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Berry fruits: compositional elements, biochemical activities, and the impact of their intake on human health, performance, and disease

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Mitochondrial matR sequences help to resolve deep phylogenetic relationships in rosids

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Marker-assisted selection: an approach for precision plant breeding in the twenty-first century

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

KAAS: an automatic genome annotation and pathway reconstruction server

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Induction of Instability at Selected Loci in Maize

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Combining bioinformatics and phylogenetics to identify large sets of single-copy orthologous genes (COSII) for comparative, evolutionary and systematic studies: a test case in the euasterid plant clade

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Repbase Update, a database of eukaryotic repetitive elements

13 July 2018

1 reference

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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Genome-wide association studies for common diseases and complex traits

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

The origin and behavior of mutable loci in maize

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Phylogeny as a guide to structure and function of membrane transport proteins.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

An overview of the non-mevalonate pathway for terpenoid biosynthesis in plants

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Flavonoids: Promising anticancer agents

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Antioxidant and antiproliferative activities of common fruits

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Cranberry proanthocyanidins and the maintenance of urinary tract health

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

BLAT—The BLAST-Like Alignment Tool

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Applications of single nucleotide polymorphisms in crop genetics

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Therapeutic potential of inhibition of the NF-kappaB pathway in the treatment of inflammation and cancer

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

It takes two transposons to tango: transposable-element-mediated chromosomal rearrangements

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

A-Type proanthocyanidin trimers from cranberry that inhibit adherence of uropathogenic P-fimbriated Escherichia coli

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Glycosyltransferases in plant natural product synthesis: characterization of a supergene family.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

The WRKY superfamily of plant transcription factors.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

MODELTEST: testing the model of DNA substitution

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Inhibition of the adherence of P-fimbriated Escherichia coli to uroepithelial-cell surfaces by proanthocyanidin extracts from cranberries.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

The disease-resistance gene Pto and the fenthion-sensitivity gene fen encode closely related functional protein kinases

13 July 2018

1 reference

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Development of universal genetic markers based on single-copy orthologous (COSII) genes in Poaceae

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Isolation of Specific Cranberry Flavonoids for Biological Activity Assessment

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

PlnTFDB: updated content and new features of the plant transcription factor database

27 September 2018

1 reference

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Using native and syntenically mapped cDNA alignments to improve de novo gene finding.

27 September 2018

1 reference

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A B-lectin receptor kinase gene conferring rice blast resistance

27 September 2018

1 reference

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Characterization of Arabidopsis ZIM, a member of a novel plant-specific GATA factor gene family

27 September 2018

1 reference

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Exploiting EST databases for the development and characterization of gene-derived SSR-markers in barley (Hordeum vulgare L.).

27 September 2018

1 reference

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Antioxidant activities and antitumor screening of extracts from cranberry fruit (Vaccinium macrocarpon).

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

Identification of procyanidins and anthocyanins in blueberries and cranberries (Vaccinium spp.) using high-performance liquid chromatography/mass spectrometry

27 September 2018

1 reference

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A bHLH transcription factor mediates organ, region and flower type specific signals on dihydroflavonol-4-reductase (dfr) gene expression in the inflorescence of Gerbera hybrida (Asteraceae).

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4076063

The first genetic map of the American cranberry: exploration of synteny conservation and quantitative trait loci

27 September 2018

1 reference

12 December 2020

Absorption, metabolism and health effects of dietary flavonoids in man

1 reference

12 December 2020

Transmission of a cyclical translocation in two cranberry cultivars

1 reference

12 December 2020

Distribution of cranberry fruit-rotting fungi in new jersey and evidence for nonspecific host resistance

1 reference

12 December 2020

Antioxidant capacity in cranberry is influenced by cultivar and storage temperature

1 reference

12 December 2020

RAPDs identify varietal misclassification and regional divergence in cranberry [Vaccinium macrocarpon (Ait.) Pursh]

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2229-14-165

1 reference

Dimensions Publication ID

7 August 2017

0 references

1 reference

7 August 2017

1 reference