(Q35284791)

25844937

7 August 2017

title

Use of formalin-fixed paraffin-embedded samples for gene expression studies in breast cancer patients (English)

1 reference

7 August 2017

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Maurizio Callari

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Matteo Dugo

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Patrizia Miodini

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Biagio Paolini

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Luca Gianni

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Maria Grazia Daidone

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Vera Cappelletti

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

author name string

Eleonora Di Buduo

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Manuela Scuro

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

Giampaolo Bianchini

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

language of work or name

English

0 references

publication date

6 April 2015

1 reference

7 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

volume

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

page(s)

e0123194

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

8 June 2020

copyright license

start time

6 April 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

affy

object named as

affy

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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12 July 2018

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Accurate data processing improves the reliability of Affymetrix gene expression profiles from FFPE samples

12 July 2018

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An optimized workflow for improved gene expression profiling for formalin-fixed, paraffin-embedded tumor samples

12 July 2018

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12 July 2018

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Effects of warm ischemic time on gene expression profiling in colorectal cancer tissues and normal mucosa

12 July 2018

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Validation of ovarian cancer gene expression signatures for survival and subtype in formalin fixed paraffin embedded tissues

12 July 2018

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Expression profiling of archival tumors for long-term health studies

12 July 2018

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Identification and validation of gene expression models that predict clinical outcome in patients with early-stage laryngeal cancer

12 July 2018

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Practical implications of gene-expression-based assays for breast oncologists.

12 July 2018

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Gene expression profiling in breast cancer: classification, prognostication, and prediction

12 July 2018

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Is gene array testing to be considered routine now?

12 July 2018

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Personalized medicine: the road ahead

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Gene expression profiles from formalin fixed paraffin embedded breast cancer tissue are largely comparable to fresh frozen matched tissue

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Genome-wide gene expression profiling of formalin-fixed paraffin-embedded breast cancer core biopsies using microarrays

12 July 2018

1 reference

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The colorectal cancer disease-specific transcriptome may facilitate the discovery of more biologically and clinically relevant information

12 July 2018

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A Novel Method of Amplification of FFPET-Derived RNA Enables Accurate Disease Classification with Microarrays

12 July 2018

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Quantitative expression profiling in formalin-fixed paraffin-embedded samples by affymetrix microarrays

12 July 2018

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American Society of Clinical Oncology/College Of American Pathologists guideline recommendations for immunohistochemical testing of estrogen and progesterone receptors in breast cancer

12 July 2018

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Impact of biospecimens handling on biomarker research in breast cancer

12 July 2018

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Gene expression profiling of paraffin-embedded primary melanoma using the DASL assay identifies increased osteopontin expression as predictive of reduced relapse-free survival

12 July 2018

1 reference

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Use of archived specimens in evaluation of prognostic and predictive biomarkers

12 July 2018

1 reference

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Methods comparison for high-resolution transcriptional analysis of archival material on Affymetrix Plus 2.0 and Exon 1.0 microarrays

12 July 2018

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Supervised risk predictor of breast cancer based on intrinsic subtypes

12 July 2018

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Gene expression in fixed tissues and outcome in hepatocellular carcinoma.

12 July 2018

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RNA expression analysis from formalin fixed paraffin embedded tissues

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Acquisition of biologically relevant gene expression data by Affymetrix microarray analysis of archival formalin-fixed paraffin-embedded tumours

12 July 2018

1 reference

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RNA extraction from ten year old formalin-fixed paraffin-embedded breast cancer samples: a comparison of column purification and magnetic bead-based technologies

12 July 2018

1 reference

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Determinants of RNA quality from FFPE samples

12 July 2018

1 reference

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Preliminary comparison of quantity, quality, and microarray performance of RNA extracted from formalin-fixed, paraffin-embedded, and unfixed frozen tissue samples

12 July 2018

1 reference

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Whole transcriptome amplification for gene expression profiling and development of molecular archives

12 July 2018

1 reference

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Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis

12 July 2018

1 reference

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Methods for gene expression profiling in clinical trials of adjuvant breast cancer therapy

12 July 2018

1 reference

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Technology insight: Application of molecular techniques to formalin-fixed paraffin-embedded tissues from breast cancer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Quantitative gene expression profiling in formalin-fixed, paraffin-embedded tissues using universal bead arrays

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Measurement of gene expression in archival paraffin-embedded tissues: development and performance of a 92-gene reverse transcriptase-polymerase chain reaction assay

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Diagnosis of multiple cancer types by shrunken centroids of gene expression

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Policy guidelines for the utilization of formalin-fixed, paraffin-embedded tissue sections: the UNC SPORE experience. University of North Carolina Specialized Program of Research Excellence

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Analysis of chemical modification of RNA from formalin-fixed samples and optimization of molecular biology applications for such samples

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Gene expression profiles for the prediction of progression-free survival in diffuse large B cell lymphoma: results of a DASL assay

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Molecular anatomy of breast cancer stroma and its prognostic value in estrogen receptor-positive and -negative cancers.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Identification of methods for use of formalin-fixed, paraffin-embedded tissue samples in RNA expression profiling.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

Quantitative expression profiling of RNA from formalin-fixed, paraffin-embedded tissues using randomly assembled bead arrays.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4386823

A double-labeling assay for simultaneous estimation and characterization of estrogen and progesterone receptors using radioiodinated estradiol and tritiated Org 2058

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25844937

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Global gene expression profiling of formalin-fixed paraffin-embedded tumor samples: a comparison to snap-frozen material using oligonucleotide microarrays

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25844937

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Gene expression profiling of tumour epithelial and stromal compartments during breast cancer progression

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25844937

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0123194

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json

8 June 2020

25844937

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25844937%20AND%20SRC:MED&resulttype=core&format=json