(Q35367079)

8 August 2017

title

QuASAR: quantitative allele-specific analysis of reads (English)

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8 August 2017

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Roger Pique-Regi

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author name string

Chris T Harvey

series ordinal

1

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8 August 2017

Gregory A Moyerbrailean

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8 August 2017

Gordon O Davis

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3

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8 August 2017

language of work or name

English

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publication date

4 December 2014

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8 August 2017

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8 August 2017

volume

31

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8 August 2017

issue

8

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8 August 2017

page(s)

1235-1242

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Cross-population joint analysis of eQTLs: fine mapping and functional annotation

8 August 2017

cites work

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27 July 2018

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Common genetic variants modulate pathogen-sensing responses in human dendritic cells

27 July 2018

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Innate immune activity conditions the effect of regulatory variants upon monocyte gene expression

27 July 2018

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Identification of genetic variants that affect histone modifications in human cells

27 July 2018

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Reliable identification of genomic variants from RNA-seq data

27 July 2018

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Transcriptome and genome sequencing uncovers functional variation in humans

27 July 2018

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Breast cancer risk-associated SNPs modulate the affinity of chromatin for FOXA1 and alter gene expression

27 July 2018

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DNase I sensitivity QTLs are a major determinant of human expression variation

27 July 2018

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Effects of sequence variation on differential allelic transcription factor occupancy and gene expression

27 July 2018

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Deciphering the genetic architecture of variation in the immune response to Mycobacterium tuberculosis infection

27 July 2018

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A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data

27 July 2018

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A statistical framework for eQTL mapping using RNA-seq data

27 July 2018

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Interactions between glucocorticoid treatment and cis-regulatory polymorphisms contribute to cellular response phenotypes

27 July 2018

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The architecture of gene regulatory variation across multiple human tissues: the MuTHER study

27 July 2018

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Global analysis of the impact of environmental perturbation on cis-regulation of gene expression

27 July 2018

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Gene expression in skin and lymphoblastoid cells: Refined statistical method reveals extensive overlap in cis-eQTL signals

27 July 2018

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Analysis and design of RNA sequencing experiments for identifying isoform regulation

27 July 2018

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Genome-wide allele-specific analysis: insights into regulatory variation

27 July 2018

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Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain

27 July 2018

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Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations

27 July 2018

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Trait-associated SNPs are more likely to be eQTLs: annotation to enhance discovery from GWAS

27 July 2018

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Heritable individual-specific and allele-specific chromatin signatures in humans

27 July 2018

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Variation in transcription factor binding among humans

27 July 2018

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Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data

27 July 2018

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Common regulatory variation impacts gene expression in a cell type-dependent manner

27 July 2018

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Fast and accurate short read alignment with Burrows-Wheeler transform

27 July 2018

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Genetic analysis of radiation-induced changes in human gene expression

27 July 2018

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Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum

27 July 2018

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A genome-wide association study identifies protein quantitative trait loci (pQTLs)

27 July 2018

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Population genomics of human gene expression

27 July 2018

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Maximum likelihood inference of imprinting and allele-specific expression from EST data

27 July 2018

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Allele-specific expression and eQTL analysis in mouse adipose tissue

27 July 2018

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Towards accurate detection and genotyping of expressed variants from whole transcriptome sequencing data

26 September 2018

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Cellular genomics for complex traits

26 September 2018

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A framework for variation discovery and genotyping using next-generation DNA sequencing data

26 September 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

26 September 2018

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Understanding mechanisms underlying human gene expression variation with RNA sequencing

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393517

Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution

26 September 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4393517

A direct approach to false discovery rates

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU802

10.1093/BIOINFORMATICS/BTU802

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/HarveyMDWLP15

8 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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8 August 2017

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