(Q35575881)

8 August 2017

title

A PDZ domain recapitulates a unifying mechanism for protein folding (English)

1 reference

8 August 2017

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Stefano Gianni

1

0 references

Maurizio Brunori

Maurizio Brunori

8

0 references

Michele Vendruscolo

7

Michele Vendruscolo

1 reference

Carlo Travaglini Allocatelli

8 August 2017

Carlo Travaglini-Allocatelli

6

0 references

Geerten W Vuister

Geerten W Vuister

5

0 references

Nicoletta Calosci

3

Nicoletta Calosci

1 reference

8 August 2017

author name string

Christian D Geierhaas

2

1 reference

8 August 2017

Per Jemth

4

1 reference

8 August 2017

language of work or name

English

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publication date

19 December 2006

1 reference

8 August 2017

number of pages

6

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

8 August 2017

volume

104

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8 August 2017

issue

1

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8 August 2017

page(s)

128-133

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Towards complete descriptions of the free-energy landscapes of proteins

8 August 2017

cites work

1 reference

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Phi-value analysis and the nature of protein-folding transition states

12 July 2018

1 reference

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Theory of protein folding

12 July 2018

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Transition states for protein folding have native topologies despite high structural variability

12 July 2018

1 reference

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Demonstration of a low-energy on-pathway intermediate in a fast-folding protein by kinetics, protein engineering, and simulation

12 July 2018

1 reference

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Unifying features in protein-folding mechanisms

12 July 2018

1 reference

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Exploring the cytochrome c folding mechanism: cytochrome c552 from thermus thermophilus folds through an on-pathway intermediate

12 July 2018

1 reference

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DSSPcont: Continuous secondary structure assignments for proteins.

12 July 2018

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The complete folding pathway of a protein from nanoseconds to microseconds

12 July 2018

1 reference

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Is there a unifying mechanism for protein folding?

12 July 2018

1 reference

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Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding

12 July 2018

1 reference

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Determination of a transition state at atomic resolution from protein engineering data

12 July 2018

1 reference

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Early kinetic intermediate in the folding of acyl-CoA binding protein detected by fluorescence labeling and ultrarapid mixing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765422

Three key residues form a critical contact network in a protein folding transition state

12 July 2018

1 reference

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A surprising simplicity to protein folding.

12 July 2018

1 reference

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Towards a complete description of the structural and dynamic properties of the denatured state of barnase and the role of residual structure in folding

12 July 2018

1 reference

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From snapshot to movie: phi analysis of protein folding transition states taken one step further

12 July 2018

1 reference

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Effective energy function for proteins in solution

12 July 2018

1 reference

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Kinetic evidence for an on-pathway intermediate in the folding of cytochrome c.

12 July 2018

1 reference

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Contact order, transition state placement and the refolding rates of single domain proteins.

12 July 2018

1 reference

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Theory of protein folding: the energy landscape perspective

12 July 2018

1 reference

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Transient aggregates in protein folding are easily mistaken for folding intermediates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765422

Protein folding dynamics: the diffusion-collision model and experimental data

12 July 2018

1 reference

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Optimization of rates of protein folding: the nucleation-condensation mechanism and its implications

12 July 2018

1 reference

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An integrated kinetic analysis of intermediates and transition states in protein folding reactions.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765422

Unfolding free energy changes determined by the linear extrapolation method. 1. Unfolding of phenylmethanesulfonyl alpha-chymotrypsin using different denaturants

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765422

Protein structure determination in solution by nuclear magnetic resonance spectroscopy

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765422

Intermediates in the folding reactions of small proteins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765422

The folding of an enzyme. I. Theory of protein engineering analysis of stability and pathway of protein folding

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765422

Simulation and experiment conspire to reveal cryptic intermediates and a slide from the nucleation-condensation to framework mechanism of folding

12 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602770104

Protein folding funnels: the nature of the transition state ensemble

21 January 2018

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The structure of the major transition state for folding of an FF domain from experiment and simulation

21 January 2018

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The kinetic pathway of folding of barnase

21 January 2018

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The folding of spectrin domains II: phi-value analysis of R16.

21 January 2018

1 reference

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Surprisingly high correlation between early and late stages in non-two-state protein folding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602770104

Molden: a pre- and post-processing program for molecular and electronic structures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602770104

Ultrarapid mixing experiments reveal that Im7 folds via an on-pathway intermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602770104

Unveiling a hidden folding intermediate in c-type cytochromes by protein engineering.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602770104

Kinetic folding mechanism of PDZ2 from PTP-BL.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1765422

The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding

26 September 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602770104

An Obligatory Intermediate in the Folding Pathway of Cytochromec552fromHydrogenobacter thermophilus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602770104

Folding at the speed limit

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602770104

The role of sequence and structure in protein folding kinetics; the diffusion-collision model applied to proteins L and G

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17179214

12 December 2020

inferred from PubMed ID database lookup

Contribution of a buried hydrogen bond to lambda repressor folding kinetics

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17179214

12 December 2020

inferred from PubMed ID database lookup

Folding dynamics of the B1 domain of protein G explored by ultrarapid mixing

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17179214

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.0602770104

1 reference

8 August 2017

0 references

1 reference

8 August 2017

1 reference