(Q35587949)

9 August 2017

title

Post-conversion targeted capture of modified cytosines in mammalian and plant genomes (English)

1 reference

9 August 2017

Steven R Eichten

5

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John Greally

object named as

John M Greally

13

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author name string

Qing Li

1

1 reference

9 August 2017

Masako Suzuki

2

1 reference

9 August 2017

Jennifer Wendt

3

1 reference

9 August 2017

Nicole Patterson

4

1 reference

9 August 2017

Peter J Hermanson

6

1 reference

9 August 2017

Dawn Green

7

1 reference

9 August 2017

Jeffrey Jeddeloh

8

1 reference

9 August 2017

Todd Richmond

9

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9 August 2017

Heidi Rosenbaum

10

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9 August 2017

Daniel Burgess

11

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9 August 2017

Nathan M Springer

12

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9 August 2017

language of work or name

English

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publication date

26 March 2015

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9 August 2017

published in

Nucleic Acids Research

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9 August 2017

volume

43

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9 August 2017

issue

12

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9 August 2017

page(s)

e81

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Creative Commons Attribution 4.0 International

9 August 2017

copyright license

start time

8 May 2017

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Genomic distribution of H3K9me2 and DNA methylation in a maize genome

12 July 2018

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Reconfiguration of nucleosome-depleted regions at distal regulatory elements accompanies DNA methylation of enhancers and insulators in cancer

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Kidney cancer is characterized by aberrant methylation of tissue-specific enhancers that are prognostic for overall survival

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Global analysis of DNA methylation variation in adipose tissue from twins reveals links to disease-associated variants in distal regulatory elements

12 July 2018

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Cytosine methylation changes in enhancer regions of core pro-fibrotic genes characterize kidney fibrosis development

12 July 2018

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12 July 2018

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12 July 2018

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Genome-wide hydroxymethylation tested using the HELP-GT assay shows redistribution in cancer.

12 July 2018

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12 July 2018

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12 July 2018

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Passive and active DNA methylation and the interplay with genetic variation in gene regulation

12 July 2018

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Functions of DNA methylation and hydroxymethylation in mammalian development

12 July 2018

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DNA methylation of distal regulatory sites characterizes dysregulation of cancer genes

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Maize HapMap2 identifies extant variation from a genome in flux.

12 July 2018

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Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Whole-genome bisulfite DNA sequencing of a DNMT3B mutant patient

12 July 2018

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Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

12 July 2018

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R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters

12 July 2018

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12 July 2018

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Base-resolution analyses of sequence and parent-of-origin dependent DNA methylation in the mouse genome

12 July 2018

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Library-free methylation sequencing with bisulfite padlock probes

12 July 2018

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Late-replicating heterochromatin is characterized by decreased cytosine methylation in the human genome.

12 July 2018

1 reference

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Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing

12 July 2018

1 reference

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12 July 2018

1 reference

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Epigenome-wide association studies for common human diseases

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Whole exome capture in solution with 3 Gbp of data

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Optimized design and data analysis of tag-based cytosine methylation assays

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

The behaviour of 5-hydroxymethylcytosine in bisulfite sequencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

BEDTools: a flexible suite of utilities for comparing genomic features

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Human DNA methylomes at base resolution show widespread epigenomic differences

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Highly dynamic and sex-specific expression of microRNAs during early ES cell differentiation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

BSMAP: whole genome bisulfite sequence MAPping program

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

High-resolution genome-wide cytosine methylation profiling with simultaneous copy number analysis and optimization for limited cell numbers.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Genome-scale DNA methylation maps of pluripotent and differentiated cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

A new method for accurate assessment of DNA quality after bisulfite treatment

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Comparative isoschizomer profiling of cytosine methylation: the HELP assay

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

HPRT-deficient (Lesch-Nyhan) mouse embryos derived from germline colonization by cultured cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Analysis of the DNA methylome and transcriptome in granulopoiesis reveals timed changes and dynamic enhancer methylation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

UHRF1 targets DNMT1 for DNA methylation through cooperative binding of hemi-methylated DNA and methylated H3K9.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

High density DNA methylation array with single CpG site resolution

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4499119

Epigenetic and genetic influences on DNA methylation variation in maize populations

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKV244

Mutagenic deamination of cytosine residues in DNA

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKV244

21 January 2018

Identifiers

DOI

10.1093/NAR/GKV244

1 reference

9 August 2017

1 reference

9 August 2017

1 reference