(Q35673775)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

title

Database independent proteomics analysis of the ostrich and human proteome (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Berend Snel

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Shabaz Mohammed

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Albert J.R. Heck

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

4

Bas van Breukelen

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

author name string

Danny Navarro

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Jos Boekhorst

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

language of work or name

English

0 references

publication date

22 December 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

19 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

volume

109

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

page(s)

407-412

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

Proteome-Wide Mapping of the Drosophila Acetylome Demonstrates a High Degree of Conservation of Lysine Acetylation

19 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Quantitative, high-resolution proteomics for data-driven systems biology

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Comparative assessment of site assignments in CID and electron transfer dissociation spectra of phosphopeptides discloses limited relocation of phosphate groups

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

The NCBI BioSystems database

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Infrared photoactivation reduces peptide folding and hydrogen-atom migration following ETD tandem mass spectrometry

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Effect of chemical modifications on peptide fragmentation behavior upon electron transfer induced dissociation.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Lysine acetylation targets protein complexes and co-regulates major cellular functions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Spectral profiles, a novel representation of tandem mass spectra and their applications for de novo peptide sequencing and identification

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

De novo sequencing of peptides secreted by the skin glands of the Caucasian Green Frog Rana ridibunda.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Genetic basis of human brain evolution

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Strong cation exchange-based fractionation of Lys-N-generated peptides facilitates the targeted analysis of post-translational modifications

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Comment on "Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry".

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

A phylogenomic study of birds reveals their evolutionary history

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Molecular phylogenetics of mastodon and Tyrannosaurus rex.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Analysis and validation of proteomic data generated by tandem mass spectrometry

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

MSNovo: a dynamic programming algorithm for de novo peptide sequencing via tandem mass spectrometry

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Toward Automatic Reconstruction of a Highly Resolved Tree of Life

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Proteomics-grade de novo sequencing approach

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Rapid identification of proteins by peptide-mass fingerprinting

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Charge derivatization by 4‐sulfophenyl isothiocyanate enhances peptide sequencing by post‐source decay matrix‐assisted laser desorption/ionization time‐of‐flight mass spectrometry

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Improved tools for biological sequence comparison

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3258627

Large-scale database searching using tandem mass spectra: looking up the answer in the back of the book

27 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

Electron Capture Dissociation of Multiply Charged Protein Cations. A Nonergodic Process

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

De novo sequencing, peptide composition analysis, and composition-based sequencing: a new strategy employing accurate mass determination by fourier transform ion cyclotron resonance mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

PepNovo: de novo peptide sequencing via probabilistic network modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

pNovo: de novo peptide sequencing and identification using HCD spectra

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

De novo peptide sequencing by tandem MS using complementary CID and electron transfer dissociation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

Spectrum fusion: using multiple mass spectra for de novo Peptide sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

Straightforward ladder sequencing of peptides using a Lys-N metalloendopeptidase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

LysNDeNovo: an algorithm enabling de novo sequencing of Lys-N generated peptides fragmented by electron transfer dissociation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

Comprehensive comparison of collision induced dissociation and electron transfer dissociation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

Evaluation of metalloendopeptidase Lys-N protease performance under different sample handling conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1108399108

A century of progress in molecular mass spectrometry

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22198768

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1108399108

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:22198768%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

PubMed publication ID

22198768

1 reference