(Q35781914)

10 August 2017

Selecting causal genes from genome-wide association studies via functionally coherent subnetworks (English)

1 reference

genome-wide association study

10 August 2017

0 references

Frederick P Roth

6

0 references

Marc Vidal

series ordinal

4

object named as

Marc Vidal

1 reference

10 August 2017

1

Murat Taşan

1 reference

10 August 2017

Gabriel Musso

2

1 reference

PubMed ID

25532137

10 August 2017

Tong Hao

series ordinal

3

1 reference

PubMed ID

25532137

10 August 2017

Calum A MacRae

series ordinal

5

1 reference

10 August 2017

22 December 2014

1 reference

10 August 2017

1 reference

10 August 2017

12

1 reference

10 August 2017

154-159

1 reference

10 August 2017

2

1 reference

https://scigraph.springernature.com/pub.10.1038/nmeth.3215

10 August 2017

0 references

cites work

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The diabetes gene Hhex maintains δ-cell differentiation and islet function

12 July 2018

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Sequence variants in SLC16A11 are a common risk factor for type 2 diabetes in Mexico

12 July 2018

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Novel cardiovascular gene functions revealed via systematic phenotype prediction in zebrafish

12 July 2018

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12 July 2018

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Integrating GWASs and human protein interaction networks identifies a gene subnetwork underlying alcohol dependence

12 July 2018

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Mutational landscape and significance across 12 major cancer types

12 July 2018

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Distilling pathophysiology from complex disease genetics

12 July 2018

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Genome-wide association study identifies three novel loci for type 2 diabetes

12 July 2018

1 reference

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FGF receptors: cancer biology and therapeutics

12 July 2018

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HNF1b is involved in prostate cancer risk via modulating androgenic hormone effects and coordination with other genes

12 July 2018

1 reference

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Prognostication of OCT4 isoform expression in prostate cancer.

12 July 2018

1 reference

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Diabetes risk gene and Wnt effector Tcf7l2/TCF4 controls hepatic response to perinatal and adult metabolic demand

12 July 2018

1 reference

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STRING v9.1: protein-protein interaction networks, with increased coverage and integration

12 July 2018

1 reference

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Leptin revisited: its mechanism of action and potential for treating diabetes

12 July 2018

1 reference

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HINT: High-quality protein interactomes and their applications in understanding human disease

12 July 2018

1 reference

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A Resource of Quantitative Functional Annotation for Homo sapiens Genes

12 July 2018

1 reference

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InterPro in 2011: new developments in the family and domain prediction database

12 July 2018

1 reference

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Systematic prediction of gene function in Arabidopsis thaliana using a probabilistic functional gene network

12 July 2018

1 reference

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Alterations in TCF7L2 expression define its role as a key regulator of glucose metabolism

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Rare de novo variants associated with autism implicate a large functional network of genes involved in formation and function of synapses

12 July 2018

1 reference

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De novo discovery of mutated driver pathways in cancer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Prioritizing candidate disease genes by network-based boosting of genome-wide association data.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Proteins encoded in genomic regions associated with immune-mediated disease physically interact and suggest underlying biology

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Entrez Gene: gene-centered information at NCBI

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Hundreds of variants clustered in genomic loci and biological pathways affect human height

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Androgen receptor as a therapeutic target

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

It's the machine that matters: Predicting gene function and phenotype from protein networks

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

A versatile gene-based test for genome-wide association studies

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Fast integration of heterogeneous data sources for predicting gene function with limited annotation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Associating genes and protein complexes with disease via network propagation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Prioritizing GWAS results: A review of statistical methods and recommendations for their application

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

RNA-Seq gene expression estimation with read mapping uncertainty

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

InParanoid 7: new algorithms and tools for eukaryotic orthology analysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Finding the missing heritability of complex diseases

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Next generation software for functional trend analysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Identifying relationships among genomic disease regions: predicting genes at pathogenic SNP associations and rare deletions

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Exploring the human genome with functional maps

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

An empirical framework for binary interactome mapping

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

McKusick's Online Mendelian Inheritance in Man (OMIM)

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

An en masse phenotype and function prediction system for Mus musculus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Combining guilt-by-association and guilt-by-profiling to predict Saccharomyces cerevisiae gene function

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

A critical assessment of Mus musculus gene function prediction using integrated genomic evidence

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

The implications of human metabolic network topology for disease comorbidity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Common and rare variants in multifactorial susceptibility to common diseases

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Molecular determinants of brown adipocyte formation and function

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Enhanced paracrine FGF10 expression promotes formation of multifocal prostate adenocarcinoma and an increase in epithelial androgen receptor

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

A haplotype map of the human genome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Androgen receptor in prostate cancer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

A gene atlas of the mouse and human protein-encoding transcriptomes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

A census of human cancer genes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

RNAiDB and PhenoBlast: web tools for genome-wide phenotypic mapping projects

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Predicting phenotype from patterns of annotation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Roles for Nkx3.1 in prostate development and cancer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

The future of genetic studies of complex human diseases

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Linkage disequilibrium and homozygosity of chromosome segments in finite populations

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Renal cysts and diabetes syndrome resulting from mutations in hepatocyte nuclear factor-1beta.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4480866

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.3215

Linking genes to literature: text mining, information extraction, and retrieval applications for biology

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.3215

Beta Regression for Modelling Rates and Proportions

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNMETH.3215

A probabilistic functional network of yeast genes

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25532137

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genomewide association studies--illuminating biologic pathways

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25532137

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Linkage disequilibrium in finite populations

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25532137

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NMETH.3215

1 reference

10 August 2017

1 reference

10 August 2017

1 reference

PubMed ID

25532137