(Q35842102)

English

Processing and translation initiation of non-long terminal repeat retrotransposons by hepatitis delta virus (HDV)-like self-cleaving ribozymes

scientific article published on 12 October 2011

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scholarly article

1 reference

Europe PubMed Central

10 August 2017

Processing and translation initiation of non-long terminal repeat retrotransposons by hepatitis delta virus (HDV)-like self-cleaving ribozymes (English)

1 reference

Europe PubMed Central

10 August 2017

retrotransposon

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hepatitis delta virus

object named as

hepatitis delta virus

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based on heuristic

inferred from title

author name string

Dana J Ruminski

1

1 reference

Europe PubMed Central

10 August 2017

Chiu-Ho T Webb

2

1 reference

Europe PubMed Central

10 August 2017

Nathan J Riccitelli

3

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Europe PubMed Central

10 August 2017

Andrej Lupták

4

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Europe PubMed Central

10 August 2017

language of work or name

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publication date

12 October 2011

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Europe PubMed Central

10 August 2017

Journal of Biological Chemistry

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Europe PubMed Central

10 August 2017

286

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Europe PubMed Central

10 August 2017

48

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Europe PubMed Central

10 August 2017

41286-41295

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Europe PubMed Central

10 August 2017

describes a project that uses

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Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3308841/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

HDV-like self-cleaving ribozymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3308841

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Identification of an hepatitis delta virus-like ribozyme at the mRNA 5'-end of the L1Tc retrotransposon from Trypanosoma cruzi

1 reference

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Retinoic acid inducible gene-I, more than a virus sensor

1 reference

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Identification of hammerhead ribozymes in all domains of life reveals novel structural variations

1 reference

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Structure-based search reveals hammerhead ribozymes in the human microbiome

1 reference

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Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome

1 reference

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Ubiquitous presence of the hammerhead ribozyme motif along the tree of life

1 reference

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A 1.9 A crystal structure of the HDV ribozyme precleavage suggests both Lewis acid and general acid mechanisms contribute to phosphodiester cleavage

1 reference

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Intronic hammerhead ribozymes are ultraconserved in the human genome

1 reference

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1 reference

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1 reference

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Generation of microsatellite repeat families by RTE retrotransposons in lepidopteran genomes

1 reference

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Non-long terminal repeat (non-LTR) retrotransposons: mechanisms, recent developments, and unanswered questions

1 reference

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R2 retrotransposons encode a self-cleaving ribozyme for processing from an rRNA cotranscript

1 reference

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Widespread occurrence of self-cleaving ribozymes

1 reference

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1 reference

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Retrotransposons and non-protein coding RNAs

1 reference

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Translation initiation from the ribosomal A site or the P site, dependent on the conformation of RNA pseudoknot I in dicistrovirus RNAs

1 reference

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Secondary structures for 5' regions of R2 retrotransposon RNAs reveal a novel conserved pseudoknot and regions that evolve under different constraints

1 reference

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The R2 mobile element of Rhynchosciara americana: molecular, cytological and dynamic aspects

1 reference

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DNA-directed DNA polymerase and strand displacement activity of the reverse transcriptase encoded by the R2 retrotransposon.

1 reference

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Sequence finishing and mapping of Drosophila melanogaster heterochromatin

1 reference

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11 July 2018

RNA from the 5' end of the R2 retrotransposon controls R2 protein binding to and cleavage of its DNA target site

1 reference

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11 July 2018

A genomewide search for ribozymes reveals an HDV-like sequence in the human CPEB3 gene

1 reference

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Antigenomic delta ribozyme variants with mutations in the catalytic core obtained by the in vitro selection method.

1 reference

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Unbiased in vitro selection reveals the unique character of the self-cleaving antigenomic HDV RNA sequence

1 reference

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Molecular evolution and tempo of amplification of human LINE-1 retrotransposons since the origin of primates.

1 reference

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The catalytic diversity of RNAs

1 reference

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Control of gene expression by a natural metabolite-responsive ribozyme

1 reference

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Peripheral regions of natural hammerhead ribozymes greatly increase their self-cleavage activity

1 reference

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Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity

1 reference

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Evolution of target specificity in R1 clade non-LTR retrotransposons

1 reference

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Ancient lineages of non-LTR retrotransposons in the primitive eukaryote, Giardia lamblia

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Structural diversity of self-cleaving ribozymes

1 reference

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Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elements

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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Crystal structure of a hepatitis delta virus ribozyme

1 reference

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Schistosome satellite DNA encodes active hammerhead ribozymes

1 reference

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1 reference

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Secondary structure content of the HDV ribozyme in 95% formamide

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1 reference

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1 reference

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1 reference

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Retrotransposable elements R1 and R2 interrupt the rRNA genes of most insects

1 reference

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Secondary structure of the self-cleaving RNA of hepatitis delta virus: applications to catalytic RNA design

1 reference

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1 reference

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Long-term inheritance of the 28S rDNA-specific retrotransposon R2.

1 reference

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A conformational switch controls hepatitis delta virus ribozyme catalysis

1 reference

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1 reference

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Trans-acting hepatitis delta virus ribozyme: catalytic core and global structure are dependent on the 5' substrate sequence

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M111.297283

1 reference

Europe PubMed Central

10 August 2017

1 reference

Europe PubMed Central

10 August 2017

1 reference

Europe PubMed Central

10 August 2017

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