(Q35852853)

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Impact of SNPs on methylation readouts by Illumina Infinium HumanMethylation450 BeadChip Array: implications for comparative population studies.

scientific article published on 25 November 2015

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scholarly article

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1 March 2020

Impact of SNPs on methylation readouts by Illumina Infinium HumanMethylation450 BeadChip Array: implications for comparative population studies (English)

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1 March 2020

Patrycja Daca-Roszak

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1 March 2020

Aleksandra Pfeifer

2

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1 March 2020

Dagmara Rusinek

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1 March 2020

Barbara Jarząb

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1 March 2020

Ewa Zietkiewicz

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1 March 2020

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Michał Witt

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1 March 2020

Jadwiga Zebracka-Gala

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Jadwiga Żebracka-Gala

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1 March 2020

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Aleksandra Szybińska

5

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1 March 2020

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25 November 2015

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1 March 2020

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1 March 2020

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1 March 2020

1

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2 July 2019

1003

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1 March 2020

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Creative Commons Attribution 4.0 International

25 November 2015

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April 2022 Public Data File from Crossref

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describes a project that uses

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minfi

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Aberrant methylation of ERBB pathway genes in sporadic colorectal cancer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

A comprehensive overview of Infinium HumanMethylation450 data processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

DNA methylation contributes to natural human variation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Detection of MGMT, RASSF1A, p15INK4B, and p14ARF promoter methylation in circulating tumor-derived DNA of central nervous system cancer patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

An evaluation of analysis pipelines for DNA methylation profiling using the Illumina HumanMethylation450 BeadChip platform

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

SWAN: Subset-quantile within array normalization for illumina infinium HumanMethylation450 BeadChips

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Complete pipeline for Infinium(®) Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Disease-associated epigenetic changes in monozygotic twins discordant for schizophrenia and bipolar disorder

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Increased methylation variation in epigenetic domains across cancer types

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Advances in genome-wide DNA methylation analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Whole-genome DNA methylation profiling using MethylCap-seq.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Methods in DNA methylation profiling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Principles and challenges of genomewide DNA methylation analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Epigenetic profiling of somatic tissues from human autopsy specimens identifies tissue- and individual-specific DNA methylation patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Genome-wide insights into the patterns and determinants of fine-scale population structure in humans

1 reference

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11 July 2018

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

DNA methylation profiling of human chromosomes 6, 20 and 22

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4659175

11 July 2018

Statistical significance for genomewide studies

1 reference

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11 July 2018

Gene Expression Omnibus: NCBI gene expression and hybridization array data repository

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11 July 2018

High density DNA methylation array with single CpG site resolution

1 reference

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24 September 2018

The positive false discovery rate: a Bayesian interpretation and the q -value

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21 January 2018

DNA methylation pattern is altered in childhood T-cell acute lymphoblastic leukemia patients as compared with normal thymic subsets: insights into CpG island methylator phenotype in T-ALL

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of the Infinium Methylation 450K technology

1 reference

https://pubmed.ncbi.nlm.nih.gov/26607064

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/S12864-015-2202-0

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26607064%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26607064%20AND%20SRC:MED&resulttype=core&format=json

1 March 2020

1 reference

Europe PubMed Central

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1 March 2020

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